Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0411
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr...    33   0.99 
BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p...    33   0.99 
BC012805-1|AAH12805.2|  414|Homo sapiens RANBP6 protein protein.       33   0.99 
AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p...    33   0.99 
AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein...    33   0.99 

>BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein
            protein.
          Length = 1109

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 13/59 (22%), Positives = 36/59 (61%)
 Frame = +2

Query: 38   RVLATLAEAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKXALQIALS 214
            ++++ +AE    + +  ++P   ++  ++RQ+Q++ +L+  C+  L ++ + ALQ  L+
Sbjct: 1049 KIISIIAEGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1107


>BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6
            protein.
          Length = 1105

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 13/59 (22%), Positives = 36/59 (61%)
 Frame = +2

Query: 38   RVLATLAEAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKXALQIALS 214
            ++++ +AE    + +  ++P   ++  ++RQ+Q++ +L+  C+  L ++ + ALQ  L+
Sbjct: 1045 KIISIIAEGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1103


>BC012805-1|AAH12805.2|  414|Homo sapiens RANBP6 protein protein.
          Length = 414

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 13/59 (22%), Positives = 36/59 (61%)
 Frame = +2

Query: 38  RVLATLAEAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKXALQIALS 214
           ++++ +AE    + +  ++P   ++  ++RQ+Q++ +L+  C+  L ++ + ALQ  L+
Sbjct: 354 KIISIIAEGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 412


>AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6
            protein.
          Length = 1105

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 13/59 (22%), Positives = 36/59 (61%)
 Frame = +2

Query: 38   RVLATLAEAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKXALQIALS 214
            ++++ +AE    + +  ++P   ++  ++RQ+Q++ +L+  C+  L ++ + ALQ  L+
Sbjct: 1045 KIISIIAEGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1103


>AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein
            protein.
          Length = 1105

 Score = 33.1 bits (72), Expect = 0.99
 Identities = 13/59 (22%), Positives = 36/59 (61%)
 Frame = +2

Query: 38   RVLATLAEAFRADAVPNDNPVYAQMVALLRQIQSNAELFNSCLMTLSNDHKXALQIALS 214
            ++++ +AE    + +  ++P   ++  ++RQ+Q++ +L+  C+  L ++ + ALQ  L+
Sbjct: 1045 KIISIIAEGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,895,778
Number of Sequences: 237096
Number of extensions: 1856221
Number of successful extensions: 7759
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7759
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)