Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0406
(504 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 146 2e-34
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 146 2e-34
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 126 4e-28
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 109 3e-23
UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metaz... 107 1e-22
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 100 2e-20
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 99 5e-20
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 93 2e-18
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 92 7e-18
UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;... 91 1e-17
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 90 2e-17
UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10; Trypa... 86 5e-16
UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=... 85 1e-15
UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n... 83 3e-15
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 82 6e-15
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 80 2e-14
UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000... 77 2e-13
UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n... 77 2e-13
UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n... 72 6e-12
UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2; Crypto... 72 9e-12
UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27; Archa... 70 3e-11
UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S riboso... 70 3e-11
UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, wh... 66 3e-10
UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast ... 66 3e-10
UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 66 6e-10
UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1; Guilla... 65 7e-10
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 64 2e-09
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 62 9e-09
UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S riboso... 60 4e-08
UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4; Haloba... 56 6e-07
UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2; Methan... 55 1e-06
UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000... 54 1e-06
UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S riboso... 53 3e-06
UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2; environ... 53 3e-06
UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivi... 53 3e-06
UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2; Thermo... 50 4e-05
UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2; Methan... 50 4e-05
UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1; Methan... 47 3e-04
UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5; T... 46 6e-04
UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candida... 42 0.006
UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12; Proteo... 42 0.006
UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4; Methan... 42 0.008
UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candida... 41 0.014
UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 41 0.014
UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58; Proteo... 41 0.014
UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2; Methano... 40 0.032
UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;... 40 0.042
UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14; Clostr... 38 0.097
UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 38 0.17
UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orienti... 37 0.22
UniRef50_Q7MTL5 Cluster: 50S ribosomal protein L23; n=8; Bactero... 37 0.30
UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellul... 37 0.30
UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23; Firmic... 36 0.39
UniRef50_A5K9F3 Cluster: Phosphomethylpyrimidine kinase, putativ... 36 0.39
UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7; Bacteri... 36 0.39
UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10; Bacter... 36 0.39
UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3; Bacteri... 36 0.52
UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23; ... 36 0.52
UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7; Bactero... 36 0.69
UniRef50_A0RVX6 Cluster: 50S ribosomal protein L23; n=1; Cenarch... 36 0.69
UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59; Gammap... 36 0.69
UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8; Gammapr... 36 0.69
UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11; Bacter... 36 0.69
UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23; ... 36 0.69
UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1; Psychro... 35 0.91
UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila melanogaster|... 35 0.91
UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8; Francis... 34 1.6
UniRef50_UPI0000F2BFDD Cluster: PREDICTED: similar to Coiled-coi... 34 2.1
UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11; Bacter... 34 2.1
UniRef50_Q9XIJ9 Cluster: T10O24.15; n=2; Arabidopsis thaliana|Re... 34 2.1
UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14; Bacter... 34 2.1
UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candida... 33 2.8
UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_Q11XR3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1; Lentisp... 33 3.7
UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2; ... 33 3.7
UniRef50_Q4PG94 Cluster: Putative uncharacterized protein; n=1; ... 33 3.7
UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36; Bacter... 33 3.7
UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23; ... 33 3.7
UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16; Actino... 33 4.8
UniRef50_Q8DEX8 Cluster: Secreted trypsin-like serine protease; ... 33 4.8
UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1; Bactero... 33 4.8
UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7; Bacilli... 33 4.8
UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23; ... 33 4.8
UniRef50_Q4N6P3 Cluster: Ribosomal protein L223, putative; n=2; ... 32 6.4
UniRef50_UPI0000E49786 Cluster: PREDICTED: similar to NUP153 pro... 32 8.5
UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26; Firmic... 32 8.5
UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 32 8.5
UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n... 32 8.5
UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55; Alphap... 32 8.5
UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:... 32 8.5
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 146 bits (354), Expect = 2e-34
Identities = 75/134 (55%), Positives = 96/134 (71%), Gaps = 6/134 (4%)
Frame = +1
Query: 13 KPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYN 192
+PV KALKAQ+K++KG G RVRKIR SVHF RPKTF PPR+PKYPRKS+P RNRMDA N
Sbjct: 107 QPVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAVN 166
Query: 193 IIKFPLTSEAAMKKIEDNNTL-SLLFTQVQ----TSTISRLQSRNSM-I*MLLKSTHSSG 354
IIKFPLT+EAAMKKIEDNNTL ++ T+ S++ +L + + + L++
Sbjct: 167 IIKFPLTTEAAMKKIEDNNTLVFIVHTRANKYHIKSSVKKLYDVDVLKVNTLIRPDGKKK 226
Query: 355 LMVRRKRTYDSLEI 396
VR R YD+L++
Sbjct: 227 AYVRLTRDYDALDV 240
Score = 114 bits (274), Expect = 1e-24
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIVHT ANK+HIK++VKKLYD++V KVNTLIRPDGKKKAYVRL RDYDALDVANKIGI
Sbjct: 187 LVFIVHTRANKYHIKSSVKKLYDVDVLKVNTLIRPDGKKKAYVRLTRDYDALDVANKIGI 246
Query: 432 I 434
I
Sbjct: 247 I 247
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 146 bits (354), Expect = 2e-34
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 10 VKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAY 189
VKPV KALK Q+KVVKGEHGKRVRKIR SVHFRRPKTFEPPR+PKYPRKSLPKRNRMDAY
Sbjct: 149 VKPVVKALKIQKKVVKGEHGKRVRKIRTSVHFRRPKTFEPPRNPKYPRKSLPKRNRMDAY 208
Query: 190 NIIKFPLTSEAAM 228
NIIK+PLTSEAAM
Sbjct: 209 NIIKYPLTSEAAM 221
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 126 bits (303), Expect = 4e-28
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +1
Query: 13 KPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYN 192
KPV KAL Q+KV+KG G R RKIRNSVHF RPKTF PPR+PKYPRKS+P R+RMDAYN
Sbjct: 140 KPVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPRKSVPTRSRMDAYN 199
Query: 193 IIKFPLTSEAAMK 231
IIK+PLT+EAAMK
Sbjct: 200 IIKYPLTTEAAMK 212
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 109 bits (263), Expect = 3e-23
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E+AMKKIEDNNTL
Sbjct: 80 PLTTESAMKKIEDNNTL 96
Score = 108 bits (259), Expect = 8e-23
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metazoa
group|Rep: 60S ribosomal protein - Oncorhynchus mykiss
(Rainbow trout) (Salmo gairdneri)
Length = 96
Score = 107 bits (258), Expect = 1e-22
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGI
Sbjct: 36 LVFIVDVKANKHQIKHAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 95
Query: 432 I 434
I
Sbjct: 96 I 96
Score = 61.3 bits (142), Expect = 1e-08
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 148 PRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 255
PRKS +RN++D Y IIKFPLT+E+AMKKIEDNNTL
Sbjct: 1 PRKSASRRNKLDHYAIIKFPLTTESAMKKIEDNNTL 36
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 100 bits (239), Expect = 2e-20
Identities = 47/82 (57%), Positives = 59/82 (71%)
Frame = +1
Query: 7 EVKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 186
+ K KALKA++ V+KG H + +KI S FRRPKT + R PKYP KS P+RN++D
Sbjct: 14 KAKAKAKALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYPWKSTPRRNKLDH 73
Query: 187 YNIIKFPLTSEAAMKKIEDNNT 252
Y IIKFPLT+E+AMKK DNNT
Sbjct: 74 YAIIKFPLTTESAMKKTGDNNT 95
Score = 95.1 bits (226), Expect = 8e-19
Identities = 46/60 (76%), Positives = 51/60 (85%)
Frame = +3
Query: 255 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 434
VF+V ANKH IK AVK+LYDI++ KVNTLI PDG+KKAYV LA DYDALDVANKIGII
Sbjct: 97 VFMVDVKANKHQIKQAVKRLYDIDMIKVNTLIWPDGEKKAYVPLAPDYDALDVANKIGII 156
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 99.1 bits (236), Expect = 5e-20
Identities = 44/79 (55%), Positives = 60/79 (75%)
Frame = +1
Query: 19 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 198
V +ALKAQ+ + G H K +K+ ++ FRRPKT+ PPR PK R +PKRN++DA+ II
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPKTYRPPRCPKDRRFEIPKRNKLDAFRII 125
Query: 199 KFPLTSEAAMKKIEDNNTL 255
+ P+T+EAAMKKIEDN+TL
Sbjct: 126 RHPVTTEAAMKKIEDNDTL 144
Score = 79.4 bits (187), Expect = 4e-14
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVF+V ANK IKAAV+++Y I VAKVNTL P KKAYV+L D+DALDVANKIGI
Sbjct: 144 LVFVVDRRANKPAIKAAVQEMYKIKVAKVNTLNCPKNIKKAYVKLPPDFDALDVANKIGI 203
Query: 432 I 434
I
Sbjct: 204 I 204
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 93.5 bits (222), Expect = 2e-18
Identities = 52/136 (38%), Positives = 78/136 (57%), Gaps = 9/136 (6%)
Frame = +1
Query: 16 PVTKALKAQRKVVKGEH---GKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 186
P +ALKA + V G + K +KIR V F RPKTF+ R+PKYPR S RN++D
Sbjct: 13 PKAQALKAAKAVKSGSNILKKKASKKIRTKVTFHRPKTFKKERNPKYPRISATPRNKLDH 72
Query: 187 YNIIKFPLTSEAAMKKIEDNNTLSLLF------TQVQTSTISRLQSRNSMI*MLLKSTHS 348
Y I+K+PLT+E+AMKKIEDNNTL + +++ + ++ + L++ +
Sbjct: 73 YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQSKKVNTLIRPDGT 132
Query: 349 SGLMVRRKRTYDSLEI 396
VR YD+L++
Sbjct: 133 KKAYVRLTPDYDALDV 148
Score = 93.1 bits (221), Expect = 3e-18
Identities = 47/61 (77%), Positives = 49/61 (80%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV A+K IK AVKK+YDI KVNTLIRPDG KKAYVRL DYDALDVANKIGI
Sbjct: 95 LVFIVDIRADKKKIKDAVKKMYDIQSKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGI 154
Query: 432 I 434
I
Sbjct: 155 I 155
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 91.9 bits (218), Expect = 7e-18
Identities = 44/88 (50%), Positives = 61/88 (69%)
Frame = +1
Query: 7 EVKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 186
E + KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++
Sbjct: 14 EAEAKAKALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGH 73
Query: 187 YNIIKFPLTSEAAMKKIEDNNTLSLLFT 270
Y +IKFPLT+E+A+K+ E+NNT LLFT
Sbjct: 74 YAVIKFPLTTESAVKRTEENNT--LLFT 99
Score = 91.5 bits (217), Expect = 1e-17
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L+F V ANKH IK AVKKLYD +VA+V TLI PDG+KKA VRLA DYDALDVANKIGI
Sbjct: 96 LLFTVDVKANKHQIKQAVKKLYDGDVAEVTTLIPPDGEKKACVRLAPDYDALDVANKIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;
n=2; Ostreococcus|Rep: RL23A_FRIAG 60S ribosomal protein
L23A - Ostreococcus tauri
Length = 259
Score = 91.5 bits (217), Expect = 1e-17
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANK IK AVK++YDI+ AKVNTLIRP+G KKAY RL D+DALDVAN+IGI
Sbjct: 199 LVFIVDARANKRQIKEAVKRMYDIDCAKVNTLIRPNGDKKAYCRLTADHDALDVANRIGI 258
Query: 432 I 434
I
Sbjct: 259 I 259
Score = 35.5 bits (78), Expect = 0.69
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 20/142 (14%)
Frame = +1
Query: 19 VTKALKAQRKVVKGEHGKRVRK-IRNSVHFR----------------RPKTFEPPRHPKY 147
V KA KA + V KG GK ++K + H R RP+T + R P Y
Sbjct: 80 VNKASKAAKFVKKGAKGKLLKKRFSATFHSRETDHRERLTSDVLTVYRPRTLKHERKPAY 139
Query: 148 PRKSLPKRNRMDAYNIIKFPLTS-EAAMKKIEDNNTLSLLFTQ--VQTSTISRLQSRNSM 318
PR S+P + ++D +++ + + E + + N S + + +++ ++ N++
Sbjct: 140 PRVSVPSKPKLDRFSVPEDSIDGRETDRRTLSSLNHSSQILKHPLANETALAKTENNNTL 199
Query: 319 I*MLLKSTHSSGLMVRRKRTYD 384
+ ++ + + KR YD
Sbjct: 200 VFIVDARANKRQIKEAVKRMYD 221
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 90.2 bits (214), Expect = 2e-17
Identities = 41/80 (51%), Positives = 55/80 (68%)
Frame = +1
Query: 16 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 195
P KA A++ VVKG +GK+ K+R S FR PKT + R PKY K++P NR+D+Y +
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKV 62
Query: 196 IKFPLTSEAAMKKIEDNNTL 255
I+ P+TSE AMKK+ED N L
Sbjct: 63 IEQPITSETAMKKVEDGNIL 82
Score = 89.0 bits (211), Expect = 5e-17
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVF V ANK+ IK AVK+LY+++V KVNTL+RP+G KKAYVRL DYDALD+AN+IG
Sbjct: 82 LVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGY 141
Query: 432 I 434
I
Sbjct: 142 I 142
>UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L23a -
Trypanosoma brucei brucei
Length = 164
Score = 85.8 bits (203), Expect = 5e-16
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L FIV + ANK IK A++KLY + KVNTLIRPDG KKAY+RL+ YDALD ANK+G+
Sbjct: 104 LTFIVDSRANKTEIKKAIRKLYQVKTVKVNTLIRPDGLKKAYIRLSASYDALDTANKMGL 163
Query: 432 I 434
+
Sbjct: 164 V 164
Score = 60.1 bits (139), Expect = 3e-08
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Frame = +1
Query: 79 RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLS 258
RK FRRP T+ P K +N+ DA+ II++PLT++ AMKKIE+NNTL+
Sbjct: 46 RKAYTRPQFRRPHTYRRPATVKPSSNVSAIKNKWDAFRIIRYPLTTDKAMKKIEENNTLT 105
Query: 259 LLF------TQVQTSTISRLQSRNSMI*MLLKSTHSSGLMVRRKRTYDSLE 393
+ T+++ + Q + + L++ +R +YD+L+
Sbjct: 106 FIVDSRANKTEIKKAIRKLYQVKTVKVNTLIRPDGLKKAYIRLSASYDALD 156
>UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L23, putative -
Babesia bovis
Length = 154
Score = 84.6 bits (200), Expect = 1e-15
Identities = 42/61 (68%), Positives = 47/61 (77%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV + ANK I AV +LYD+ +VNTL RPDG KKAYVRL+ D DALDVANKIGI
Sbjct: 94 LVFIVDSRANKEKIAKAVSELYDVKCVRVNTLNRPDGLKKAYVRLSPDQDALDVANKIGI 153
Query: 432 I 434
I
Sbjct: 154 I 154
Score = 55.2 bits (127), Expect = 8e-07
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNR-MDAYNIIK 201
K K VK + KIR + HF R +T P+ PK R + ++ +D ++IIK
Sbjct: 17 KQAKIAANSVKKSTTAKGYKIRRNTHFFRGRTLTLPKSPKVKRHLITAHSKKLDKFSIIK 76
Query: 202 FPLTSEAAMKKIEDNNTL 255
+PLT+E +MK IE+ NTL
Sbjct: 77 YPLTTEKSMKMIEEINTL 94
>UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n=2;
Theileria|Rep: 60S ribosomal protein L23a, putative -
Theileria parva
Length = 152
Score = 83.4 bits (197), Expect = 3e-15
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVF+V ANK + AV +LYDI VNTLIRPDG+KKA+VRL+ D DALDVANKIGI
Sbjct: 92 LVFVVDPRANKAKVAKAVSQLYDITPVHVNTLIRPDGQKKAFVRLSPDQDALDVANKIGI 151
Query: 432 I 434
I
Sbjct: 152 I 152
Score = 60.1 bits (139), Expect = 3e-08
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 201
KA A R V K K+V+ RN+ HF R +T R PKY +K ++D ++I++
Sbjct: 16 KAKLASRSVKKSTSVKKVKTRRNT-HFFRGRTLSLKRTPKYEKKVKTAYTKKLDKFSIVR 74
Query: 202 FPLTSEAAMKKIEDNNTL 255
+PLT+E+AMK IE+ NTL
Sbjct: 75 YPLTTESAMKMIEELNTL 92
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 82.2 bits (194), Expect = 6e-15
Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDV-ANKIG 428
LVFIV ANK IK A+KKLYDI+ K+NTLIRPDG KKA+ RL D DALD+ A K+G
Sbjct: 95 LVFIVDVKANKAQIKQALKKLYDIDTVKINTLIRPDGSKKAFARLTADVDALDIAATKLG 154
Query: 429 II 434
++
Sbjct: 155 LV 156
Score = 79.0 bits (186), Expect = 6e-14
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
+A KA + +KG H + K+R S F RPKT R PKYPRKS+P R+D + II
Sbjct: 19 QAKKAAQAALKGVHAHKRTKVRLSTTFHRPKTLVLSRAPKYPRKSVPHEPRLDEHKIIVH 78
Query: 205 PLTSEAAMKKIEDNNTL 255
PL +E A+KKIE+ NTL
Sbjct: 79 PLNTEGALKKIEEQNTL 95
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 80.2 bits (189), Expect = 2e-14
Identities = 38/80 (47%), Positives = 52/80 (65%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KA A V KG K RK+R SV FRRP T P+ P YPR+S+ K +MD + I+K
Sbjct: 33 KAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKA 92
Query: 205 PLTSEAAMKKIEDNNTLSLL 264
PLT+E+A +KIE +NT++ +
Sbjct: 93 PLTTESATQKIEGSNTITFM 112
Score = 70.9 bits (166), Expect = 1e-11
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
+ F+V ANK + AV K+YD+ V +VNTLI P G+KKA+V L+ +++A DVANKIG+
Sbjct: 109 ITFMVDMFANKSQVADAVAKMYDVKVKRVNTLITPRGEKKAFVTLSPEFEAADVANKIGL 168
Query: 432 I 434
I
Sbjct: 169 I 169
>UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000;
n=1; Mus musculus|Rep: PREDICTED: similar to hCG2001000
- Mus musculus
Length = 137
Score = 77.0 bits (181), Expect = 2e-13
Identities = 47/86 (54%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +3
Query: 186 LQHH*IPSHV*SSNEED*R*QHLVFIVHTSANKHHIKAAVKK---LYDINVAKVNTLIRP 356
L+HH IP S EE VF V ANK +K AVKK + DI +AKVNTLIRP
Sbjct: 53 LKHHQIPPDNWVSQEET-EDNTSVFTVDVQANKSQMKEAVKKVNDICDIAMAKVNTLIRP 111
Query: 357 DGKKKAYVRLARDYDALDVANKIGII 434
+G+ K YV LA DY+ LDVANKIG I
Sbjct: 112 NGENKMYVWLAPDYEPLDVANKIGFI 137
>UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n=2;
Plasmodium chabaudi|Rep: 60S ribosomal protein L23a,
putative - Plasmodium chabaudi
Length = 147
Score = 77.0 bits (181), Expect = 2e-13
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFI A+K IK +VK L+DI AKVN L R +G KKAYVRL++D+DAL+VANKIGI
Sbjct: 87 LVFICDKRADKRKIKKSVKSLFDIKCAKVNVLNRLNGDKKAYVRLSKDHDALEVANKIGI 146
Query: 432 I 434
+
Sbjct: 147 L 147
Score = 63.3 bits (147), Expect = 3e-09
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Frame = +1
Query: 73 RVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN 246
+++KI S+ F+RP+T ++PK P+ KS + +D Y IIK+PLTSE AMKKIE+
Sbjct: 26 KMQKITTSIRFKRPRTLRLKKNPKCPKILKSCHTKT-LDKYGIIKYPLTSEKAMKKIEEI 84
Query: 247 NTLSLLF------TQVQTSTISRLQSRNSMI*MLLKSTHSSGLMVRRKRTYDSLEI 396
NTL + +++ S S + + + +L + VR + +D+LE+
Sbjct: 85 NTLVFICDKRADKRKIKKSVKSLFDIKCAKVNVLNRLNGDKKAYVRLSKDHDALEV 140
>UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n=3;
Plasmodium|Rep: 60S ribosomal protein L23a, putative -
Plasmodium vivax
Length = 195
Score = 72.1 bits (169), Expect = 6e-12
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +1
Query: 40 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLT 213
Q K E K+ +KI S+ F+RPKT + P++PK P+ KS K+ +D Y I+K+PLT
Sbjct: 63 QVKKAAAEESKKKKKITTSIKFKRPKTLKLPKNPKCPKVIKSCYKKT-LDKYGILKYPLT 121
Query: 214 SEAAMKKIEDNNTL 255
SE AMKKIE+ NTL
Sbjct: 122 SEKAMKKIEEINTL 135
Score = 69.7 bits (163), Expect = 3e-11
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFI A+K I +VK L+ I+ KVN L R +G KKAYVRL++D+DAL+VANKIGI
Sbjct: 135 LVFICDKRADKKKITKSVKNLFGISCEKVNVLNRLNGDKKAYVRLSKDHDALEVANKIGI 194
Query: 432 I 434
+
Sbjct: 195 L 195
>UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L23A -
Cryptosporidium parvum Iowa II
Length = 156
Score = 71.7 bits (168), Expect = 9e-12
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 22 TKA-LKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 198
TKA K + VK KIR V F RPKT + R+PKY RKS+ + +D Y+II
Sbjct: 18 TKANAKKTAQAVKNSKRSSTTKIRTRVQFYRPKTLKLQRNPKYERKSIKTQKSLDCYDII 77
Query: 199 KFPLTSEAAMKKIEDNNTLSLLFTQVQTST 288
K P+T+E+AMK +E NT+ L + T
Sbjct: 78 KRPITTESAMKMVETLNTIVFLVNERANKT 107
Score = 66.5 bits (155), Expect = 3e-10
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
+VF+V+ ANK IK AV KLYD+ VA VNT+ KKA+V+L+ D +A+DVA++IGI
Sbjct: 96 IVFLVNERANKTQIKYAVNKLYDVKVANVNTVNTFGDGKKAFVKLSPDVEAVDVASRIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27;
Archaea|Rep: 50S ribosomal protein L23P - Methanopyrus
kandleri
Length = 95
Score = 70.1 bits (164), Expect = 3e-11
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L FIV ANK IK AV++L+D+ V KVNTLI P G+KKAYV+L +Y A DVA +GI
Sbjct: 35 LTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPTGEKKAYVKLKPEYRAEDVAVDLGI 94
Query: 432 I 434
+
Sbjct: 95 L 95
>UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 169
Score = 69.7 bits (163), Expect = 3e-11
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +1
Query: 112 PKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLSLL 264
PKT R PK PRKS P+RN++D Y IIKFPLT+E+AMKKIEDN + ++
Sbjct: 3 PKTLHLRRQPKCPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNTLVFIV 53
Score = 55.6 bits (128), Expect = 6e-07
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 353
LVFIV ANKH IK AVKKLYDI+VAKVN LIR
Sbjct: 49 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNALIR 82
>UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=7; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_85, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 150
Score = 66.5 bits (155), Expect = 3e-10
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
+VF V+ A K IK A K+Y++ V KVN L GKKKAY+RL + DAL++ANKIGI
Sbjct: 90 MVFYVNQKATKPQIKRAFSKIYEVKVRKVNILNTFGGKKKAYIRLGGENDALNLANKIGI 149
Query: 432 I 434
I
Sbjct: 150 I 150
Score = 45.2 bits (102), Expect = 8e-04
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = +1
Query: 22 TKALKAQRKVVKGEHGKRVRKIR----NSVHFRRPKTF-EPPRHPKYPRKSLPKRNRMDA 186
T KAQ+ K+V + R N H +P PR + R+ P +D
Sbjct: 8 TTTQKAQKAAKNARVAKKVIRARTHFQNRFHTAKPLALARKPRFTRLTRQLKPITKGLDF 67
Query: 187 YNIIKFPLTSEAAMKKIEDNNTLSLLFTQVQT 282
N++K PL +E MKK+ED NT+ Q T
Sbjct: 68 QNVLKHPLITEKDMKKMEDENTMVFYVNQKAT 99
>UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast
precursor; n=1; Spinacia oleracea|Rep: 50S ribosomal
protein L23, chloroplast precursor - Spinacia oleracea
(Spinach)
Length = 198
Score = 66.5 bits (155), Expect = 3e-10
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L+F V A+K I+ A+ + + V KVNTLIRPDG KKAY+ L ++Y+A ++A KIGI
Sbjct: 134 LLFTVDVRADKKMIREAISNFFGVKVRKVNTLIRPDGTKKAYIMLNKEYNASELAKKIGI 193
Score = 40.7 bits (91), Expect = 0.018
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1
Query: 109 RPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLSLLFT 270
+PKT + + KYPR+ L D Y I++ P+ +EAA+K I D N SLLFT
Sbjct: 92 QPKTSKKAKKLKYPRRIL------DVYQILQSPIITEAAIKNIADEN--SLLFT 137
>UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Archaeoglobus fulgidus
Length = 83
Score = 65.7 bits (153), Expect = 6e-10
Identities = 28/60 (46%), Positives = 42/60 (70%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L IV A K HIK ++KL+++ V +VNTLI P G+KKAY++L DY A ++ +K+G+
Sbjct: 23 LTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEKKAYIKLKPDYSAEEILSKLGV 82
>UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L23A -
Guillardia theta (Cryptomonas phi)
Length = 117
Score = 65.3 bits (152), Expect = 7e-10
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L F+V NK+ +K + KL+ + K+N+LI +GKKK +V+L ++DALDVANKIG
Sbjct: 57 LTFLVEPMNNKNSLKKIISKLFKVKTIKINSLISMNGKKKIFVKLGPEHDALDVANKIGY 116
Query: 432 I 434
I
Sbjct: 117 I 117
Score = 37.1 bits (82), Expect = 0.22
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +1
Query: 154 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLSLL 264
K++ KRN + Y + +P+TSE+AMKKI+ +NTL+ L
Sbjct: 26 KNIQKRNFI--YKQLIYPVTSESAMKKIQTSNTLTFL 60
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/60 (50%), Positives = 44/60 (73%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
+VFIV A+K I+ A + +++ VA+VNTLI P G KKA++RLA D A+DVA+K+G+
Sbjct: 81 IVFIVDRRASKPEIRKAFETVFETKVARVNTLITPLGLKKAFIRLAPDVQAMDVASKMGL 140
Score = 60.5 bits (140), Expect = 2e-08
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRV--RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 198
+ALKAQ+ ++ HG RV +KIR +VHF RPKT + P YPR + K + D +++
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYPRNPIKKGSWDDPCDLL 62
Query: 199 KFPLTSEAAMKKIEDNNTL 255
++P+ ++ +IE NNT+
Sbjct: 63 RYPIKTDENTTQIEKNNTI 81
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 61.7 bits (143), Expect = 9e-09
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +1
Query: 7 EVKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 180
+ K ALK ++ ++G H R RKI V FRRPKT++ R PKY RKS+PKR R+
Sbjct: 36 KAKAKQDALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVPKYTRKSIPKRPRL 93
>UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 175
Score = 59.7 bits (138), Expect = 4e-08
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +1
Query: 133 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNT 252
R PKYPRKS P+RN+ D I+KF LT+++AMK IEDNNT
Sbjct: 48 REPKYPRKSTPRRNKHDHDAIVKFSLTTKSAMKNIEDNNT 87
Score = 37.9 bits (84), Expect = 0.13
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 255 VFIVHTSANKHHIKAAVKKLYDINVAKVNTL 347
VFIV ANKH I+ A + LYDI+ A V TL
Sbjct: 89 VFIVDAKANKHQIEQAGETLYDIDTANVTTL 119
>UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L23P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 85
Score = 55.6 bits (128), Expect = 6e-07
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L F V A+K + AV++ YD+ V +VNT DG+KKA VRL+ D DA +VA++IG+
Sbjct: 25 LQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDAQEVASRIGV 84
>UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
50S ribosomal protein L23P - Methanobacterium
thermoautotrophicum
Length = 86
Score = 54.8 bits (126), Expect = 1e-06
Identities = 22/60 (36%), Positives = 41/60 (68%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L F+V + K ++ A ++L+ + V +VNT + P G+K AY++LA+++ A D+A K+G+
Sbjct: 26 LAFVVMRKSTKKDVRRAFEELFAVKVERVNTQVTPRGQKIAYIKLAKEHSAEDIAVKLGV 85
>UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG2001000 - Monodelphis domestica
Length = 144
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +3
Query: 294 KAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKI 425
K VKKLYDI VAKV+TL DG+KK Y+ L + +ALDVANK+
Sbjct: 76 KQVVKKLYDIYVAKVSTLFWLDGEKKTYIYLTPNCNALDVANKM 119
Score = 38.7 bits (86), Expect = 0.074
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +1
Query: 178 MDAYNIIKFPLTSEAAMKKIEDNNTL 255
+D Y IIKFPL +E+AMKKIED++ L
Sbjct: 41 LDHYAIIKFPLPTESAMKKIEDDDIL 66
>UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L23a - Homo sapiens
Length = 87
Score = 53.2 bits (122), Expect = 3e-06
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
LVF V A KH IK AVKKLYD +VAKV+ LIRPD ++
Sbjct: 10 LVFTVDVKATKHQIKQAVKKLYDTDVAKVHALIRPDAGRR 49
>UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2;
environmental samples|Rep: 50S ribosomal protein L23 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 96
Score = 53.2 bits (122), Expect = 3e-06
Identities = 31/57 (54%), Positives = 35/57 (61%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIG 428
FIV K IKAAV++L D+ V KVNT I G K A VRLA YDA D A K+G
Sbjct: 39 FIVRRETTKADIKAAVEELLDVQVVKVNTRITITG-KHASVRLAEGYDAEDAALKLG 94
>UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivirga
maquilingensis IC-167|Rep: 50S ribosomal protein L23 -
Caldivirga maquilingensis IC-167
Length = 86
Score = 53.2 bits (122), Expect = 3e-06
Identities = 25/61 (40%), Positives = 39/61 (63%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L +V S NK IK V+K Y + V V TLI +G+KKAYVRL+ + +A+++ +G+
Sbjct: 26 LTIVVPRSVNKKVIKDYVEKAYKVKVIDVRTLITMEGEKKAYVRLSSENNAIELLTNLGL 85
Query: 432 I 434
+
Sbjct: 86 L 86
>UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L23P -
Picrophilus torridus
Length = 82
Score = 49.6 bits (113), Expect = 4e-05
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
+ F+V+ A K IK V+ +++ VAKVN +I +G KKA V LA+D+ A +V ++GI
Sbjct: 23 ITFLVNRKATKEAIKNEVEARFNVKVAKVNMMIAKNG-KKAIVTLAKDFSAEEVGGRMGI 81
>UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L23P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 86
Score = 49.6 bits (113), Expect = 4e-05
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
+ F+V SANK IK A + LYD V VNT I P G K A + L A D+A ++G+
Sbjct: 26 ITFVVRRSANKRVIKEAFQDLYDTKVVGVNTHITPRGNKVATIELEEADAAEDIAVRLGV 85
>UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1;
Methanospirillum hungatei JF-1|Rep: 50S ribosomal
protein L23P - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 82
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L FIV A+K IK A++K++D V +V TL+ G+KKA V + A ++ +++GI
Sbjct: 22 LQFIVDRKASKGQIKVAIEKMFDQPVTRVRTLMNNRGEKKAMVSFSNPKAAEEILSRLGI 81
Query: 432 I 434
+
Sbjct: 82 M 82
>UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L23,
putative - Trichomonas vaginalis G3
Length = 140
Score = 45.6 bits (103), Expect = 6e-04
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIG 428
+ F V A K I AA +LY + KV T+I KKAY+RL + +A+++A +IG
Sbjct: 80 MTFWVDIKATKTEIAAAFNRLYKVKPVKVCTVITSKFVKKAYIRLPANVEAMNIATEIG 138
Score = 43.6 bits (98), Expect = 0.003
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSL-PKRNRMDAYNIIK 201
KA A + + +G+ K V K RN F + PR P + K++ P + + Y II+
Sbjct: 4 KAQAAAQTLAQGQK-KEVTKTRNFTKFGKNAAQVVPRRPAFEHKAVKPVSLKHNDYKIIR 62
Query: 202 FPLTSEAAMKKIEDNNTLS 258
P+TS+ + KIE+ NT++
Sbjct: 63 GPVTSDKSTVKIENENTMT 81
>UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L25/L23 - Candidatus Nitrosopumilus maritimus SCM1
Length = 88
Score = 42.3 bits (95), Expect = 0.006
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
+ FIV SA+K I AV LY+ V VNT R KKA+V+ A D+A KIG+
Sbjct: 29 ICFIVERSASKPEISEAVNTLYNEKVLNVNT-ARTIYGKKAFVQFENTEKARDLATKIGM 87
Query: 432 I 434
+
Sbjct: 88 L 88
>UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Rhodopseudomonas palustris
Length = 99
Score = 42.3 bits (95), Expect = 0.006
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 377
+VF V A K IK AV+KL+D+ V VNTL+R GK KA+
Sbjct: 30 VVFKVQGGATKPQIKEAVEKLFDVKVKSVNTLVR-KGKTKAF 70
>UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L23P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 82
Score = 41.9 bits (94), Expect = 0.008
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L FIV T +NK I V+KLY V V T+ G KKA + A ++A +IG+
Sbjct: 22 LQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTKKAVLAFEEPEAAHEIATRIGL 81
Query: 432 I 434
+
Sbjct: 82 M 82
>UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein L25/L23
- Methanoregula boonei (strain 6A8)
Length = 83
Score = 41.1 bits (92), Expect = 0.014
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L F+V A K IK ++K +D V V+TL+ G+KKA V A ++ +++GI
Sbjct: 23 LQFLVDRKATKQDIKREIEKAFDQKVKSVHTLMSMHGEKKAVVSFENAKAAEEILSRLGI 82
Query: 432 I 434
+
Sbjct: 83 M 83
>UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycoplasma
gallisepticum|Rep: 50S ribosomal protein L23 -
Mycoplasma gallisepticum
Length = 108
Score = 41.1 bits (92), Expect = 0.014
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII* 437
F+V+ ANK++IK A K +Y + VNT I KK A VR KI II
Sbjct: 29 FLVNAKANKNYIKQAFKAIYGVTPIAVNTKI----KKPARVRTGTQNPGYSRLEKIAII- 83
Query: 438 TVPYFLRIKI 467
TVP+ + + I
Sbjct: 84 TVPFGVEVAI 93
>UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 107
Score = 41.1 bits (92), Expect = 0.014
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 13/72 (18%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI----------RPDGK---KKAYVRLAR 392
+VF V SA K IKAAV+KL+++ V VNTL+ RP + KKAYV+LA
Sbjct: 37 VVFKVAPSATKPQIKAAVEKLFNVKVTGVNTLVQKGKVKRVKGRPGRRSDIKKAYVQLA- 95
Query: 393 DYDALDVANKIG 428
+ ++D+ K+G
Sbjct: 96 EGQSIDLTAKLG 107
>UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L23 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 82
Score = 39.9 bits (89), Expect = 0.032
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L FIV A K IK ++ ++ VA V T++ G+KKA V A A ++ +++GI
Sbjct: 22 LQFIVQRDATKQDIKRELESAFEQEVANVRTMMTMKGEKKAIVTFADAKAAEEILSRLGI 81
Query: 432 I 434
+
Sbjct: 82 M 82
>UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 255
Score = 39.5 bits (88), Expect = 0.042
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 84
A S V NLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 166 AYSVVSRNLMIARWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 212
>UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14;
Clostridia|Rep: 50S ribosomal protein L23 - Clostridium
perfringens
Length = 97
Score = 38.3 bits (85), Expect = 0.097
Identities = 19/38 (50%), Positives = 28/38 (73%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
FIVH +ANK IK AV++++++ VA V T+ R +GK K
Sbjct: 29 FIVHMAANKVQIKRAVEEVFNVKVADVKTM-RFEGKTK 65
>UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2;
Mycoplasma|Rep: 50S ribosomal protein L23 - Mycoplasma
pneumoniae
Length = 237
Score = 37.5 bits (83), Expect = 0.17
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +3
Query: 255 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 434
VF+V+ A+K +K A + +Y I KVNTLIR K +R + L K+ +I
Sbjct: 28 VFVVNPKASKTRVKLAFELVYGIKPLKVNTLIR----KPTTIRGGSRFPGLSKLEKLAVI 83
Query: 435 *TVPYFLRIKI 467
T+P + I +
Sbjct: 84 -TLPKGIAISV 93
>UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L23 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 98
Score = 37.1 bits (82), Expect = 0.22
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +3
Query: 255 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 377
+F+V +ANK++I A++ ++++NV KVN +I GK K +
Sbjct: 28 IFLVQRNANKYNISKAIEGIFNVNVIKVN-IINMIGKTKRF 67
>UniRef50_Q7MTL5 Cluster: 50S ribosomal protein L23; n=8;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 97
Score = 36.7 bits (81), Expect = 0.30
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
F V +ANK IK AV+ +Y++ V VNT+ R DGK+K
Sbjct: 26 FRVSPNANKIEIKKAVEAMYNVKVEDVNTM-RYDGKRK 62
>UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellular
organisms|Rep: 50S ribosomal protein L23P - Nanoarchaeum
equitans
Length = 78
Score = 36.7 bits (81), Expect = 0.30
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +3
Query: 282 KHHIKAAVKKLYD---INVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIG 428
+ + K+ +K+ ++ V KVNTLI G KKAYVR + A VA ++G
Sbjct: 25 REYTKSKIKEFFEKKGYKVKKVNTLITKKGLKKAYVRFKEEGVARKVAEELG 76
>UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23;
Firmicutes|Rep: 50S ribosomal protein L23 - Dorea
longicatena DSM 13814
Length = 101
Score = 36.3 bits (80), Expect = 0.39
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLY-DINVAKVNTLIRPDGKKK 371
F+VH A K IK AV+K++ V KVNT+ DGKKK
Sbjct: 30 FLVHPEATKSQIKEAVEKMFTGTKVEKVNTM-NNDGKKK 67
>UniRef50_A5K9F3 Cluster: Phosphomethylpyrimidine kinase, putative;
n=2; Plasmodium|Rep: Phosphomethylpyrimidine kinase,
putative - Plasmodium vivax
Length = 321
Score = 36.3 bits (80), Expect = 0.39
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = -2
Query: 437 LYDANFVGNVQCVIISSESYVRFLL-TIRPDECVDFSNIY----IIEFLDCSLDM 288
++D FV + C+++ + Y++F L I P C+ N Y I+E LDC +D+
Sbjct: 109 VFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFYECKVILEALDCQMDL 163
>UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7;
Bacteria|Rep: 50S ribosomal protein L23 - Thermotoga
maritima
Length = 100
Score = 36.3 bits (80), Expect = 0.39
Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 255 VFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDGKKK 371
VF V+ ANK+ +K AV+KL+++ V KVN L ++P K++
Sbjct: 31 VFEVNPLANKNLVKEAVEKLFNVKVEKVNILNMKPKPKRR 70
>UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10;
Bacteria|Rep: 50S ribosomal protein L23 - Aquifex
aeolicus
Length = 103
Score = 36.3 bits (80), Expect = 0.39
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 377
F V A+K IK AV+KL+++ V KVNT+I KK+ +
Sbjct: 31 FEVALDASKPEIKYAVEKLFNVKVKKVNTMIVKPKKKRVW 70
>UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3;
Bacteria|Rep: 50S ribosomal protein L23 - uncultured
bacterium 562
Length = 98
Score = 35.9 bits (79), Expect = 0.52
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 246 QHLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
+ +VF V +ANK IK AV++L+ + V KV T I GK+K
Sbjct: 27 KQIVFKVDLTANKREIKKAVEELFKVEVTKVTTSI-VKGKRK 67
>UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L23 - Gracilaria tenuistipitata var. liui (Red alga)
Length = 103
Score = 35.9 bits (79), Expect = 0.52
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
F V A K IK A+++L+D+ V ++NTLI KK+
Sbjct: 36 FAVEVKAKKPKIKEAIEQLFDVKVQQINTLIVKPQKKR 73
>UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Flavobacterium hibernum
Length = 96
Score = 35.5 bits (78), Expect = 0.69
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDGKKK 371
F+V ANK IK AV+ Y + + VNT+ +RPD K
Sbjct: 25 FVVDKKANKVQIKKAVEAAYGVTIVSVNTMNVRPDRTTK 63
>UniRef50_A0RVX6 Cluster: 50S ribosomal protein L23; n=1;
Cenarchaeum symbiosum|Rep: 50S ribosomal protein L23 -
Cenarchaeum symbiosum
Length = 80
Score = 35.5 bits (78), Expect = 0.69
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGII 434
FIV +A+K I A+ +Y VNT R KKA+V+ A D+A KIG++
Sbjct: 23 FIVRNTASKPEIAEAISIMYGEKATGVNT-ARTIYGKKAFVQFGNVEKARDLATKIGML 80
>UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Shigella flexneri
Length = 100
Score = 35.5 bits (78), Expect = 0.69
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 401
+V V A K IKAAV+KL+++ V VNTL+ K+ R+ R D
Sbjct: 30 IVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSD 79
>UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 100
Score = 35.5 bits (78), Expect = 0.69
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 377
+VF V ANK IKAAV+KL+++ V V T + GK K +
Sbjct: 30 VVFKVLKDANKEEIKAAVEKLFEVEVNSVRT-VNVKGKTKRH 70
>UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11;
Bacteria|Rep: 50S ribosomal protein L23 - Geobacter
sulfurreducens
Length = 94
Score = 35.5 bits (78), Expect = 0.69
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 383
F V ANK IK AV+KL+ + VA+VNT + GK K + R
Sbjct: 28 FEVDRDANKIEIKEAVEKLFKVEVAEVNT-VNVAGKVKRFGR 68
>UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Thalassiosira pseudonana|Rep: Chloroplast 50S
ribosomal protein L23 - Thalassiosira pseudonana (Marine
diatom)
Length = 98
Score = 35.5 bits (78), Expect = 0.69
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
FIV ++K IKAA++ L+++ V K+NT P KK+
Sbjct: 30 FIVSPKSDKPTIKAAIEYLFNVKVVKINTAHLPKKKKR 67
>UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1;
Psychroflexus torquis ATCC 700755|Rep: 50S ribosomal
protein L23 - Psychroflexus torquis ATCC 700755
Length = 63
Score = 35.1 bits (77), Expect = 0.91
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +3
Query: 246 QHLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 365
Q L FIV SA+K I AV+ ++D+ V KVN GK
Sbjct: 24 QRLEFIVRRSASKDDIAKAVETIFDVEVEKVNVRNSKHGK 63
>UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila
melanogaster|Rep: GM06171p - Drosophila melanogaster
(Fruit fly)
Length = 290
Score = 35.1 bits (77), Expect = 0.91
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 144 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLVFIVHTSANKHHIKA 299
+P+E+ A ++ HG +QHH +P+ +EED R Q + HT A + +A
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEED-RGQQHPGLPHTPARQQEPRA 213
>UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8;
Francisella tularensis|Rep: 50S ribosomal protein L23 -
Francisella tularensis subsp. tularensis (strain FSC
198)
Length = 99
Score = 34.3 bits (75), Expect = 1.6
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 13/63 (20%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-----IRPDGK--------KKAYVRLAR 392
+VF V ANK +K AV+KL+++ V VN L R G+ KKAYV+LA
Sbjct: 30 IVFEVARFANKQDVKNAVEKLFEVKVESVNILNVKGKARRFGRVEGGTKAWKKAYVKLAE 89
Query: 393 DYD 401
+D
Sbjct: 90 GHD 92
>UniRef50_UPI0000F2BFDD Cluster: PREDICTED: similar to Coiled-coil
domain containing 45; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to Coiled-coil domain containing 45 -
Monodelphis domestica
Length = 789
Score = 33.9 bits (74), Expect = 2.1
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Frame = +1
Query: 79 RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLT--SEAAMKKIEDNNT 252
++ + ++H R PKT +P R Y +K++P + + I K +T +A KI+D+N
Sbjct: 463 QEYKENIHKRPPKTHQPVR--VYSKKTIPWNLKRSQW-IPKGSITKAKKAVPLKIKDDNL 519
Query: 253 LSLL-----FTQVQTSTISRL 300
LS+L + Q+ T+++L
Sbjct: 520 LSMLLEEFPYLQISNQTLAKL 540
>UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Bacteroides thetaiotaomicron
Length = 96
Score = 33.9 bits (74), Expect = 2.1
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 374
F+V ANK IK V+ LY++ V VNT ++ GK K+
Sbjct: 25 FVVRPDANKLEIKKEVEALYNVTVVDVNT-VKYAGKNKS 62
>UniRef50_Q9XIJ9 Cluster: T10O24.15; n=2; Arabidopsis thaliana|Rep:
T10O24.15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 33.9 bits (74), Expect = 2.1
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 RHEVKPVTKALK-AQRKVVKGEHGKRVRKIRNSVHFRRPKTFEP 129
+H+++ T A K + +KV + + GK+ R IRNS + KT+ P
Sbjct: 153 KHQIEKTTTAKKFSDKKVPEKKQGKQFRVIRNSTSLLKSKTWRP 196
>UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 122
Score = 33.9 bits (74), Expect = 2.1
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 34 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 201
K +K+ + ++GK++R+ +N RRPK + R PK +K P++ + D N IK
Sbjct: 36 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPEKRQKD--NTIK 90
Score = 33.1 bits (72), Expect = 3.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 34 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 174
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 9 KNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 55
Score = 33.1 bits (72), Expect = 3.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 34 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 174
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 18 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 64
Score = 33.1 bits (72), Expect = 3.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 34 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 174
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 27 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 73
Score = 32.7 bits (71), Expect = 4.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 43 RKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 174
+K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 3 KKIRRQKNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 46
>UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14;
Bacteria|Rep: 50S ribosomal protein L23 - Thermus
thermophilus
Length = 96
Score = 33.9 bits (74), Expect = 2.1
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
F VH A K IK AV+ + + V KVNTL GKKK
Sbjct: 28 FWVHPKATKTEIKNAVETAFKVKVVKVNTL-HVRGKKK 64
>UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candidatus
Pelagibacter ubique|Rep: 50S ribosomal protein L23 -
Candidatus Pelagibacter ubique HTCC1002
Length = 97
Score = 33.5 bits (73), Expect = 2.8
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 374
+VF V +ANK ++K ++K++ +NV K+N + + + K A
Sbjct: 28 IVFKVPRAANKTNLKKNIEKIFKVNVTKINIINKQNRTKVA 68
>UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 73
Score = 33.1 bits (72), Expect = 3.7
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 64 HGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 243
H K RK+ N+ ++PK F P P PR SL + D I + + + + + +
Sbjct: 6 HKKHCRKLYNTYSTKKPKRFFKPSRPPPPRNSLVDDDDDDDDKTITYSIGNLETLLLLLN 65
Query: 244 NN 249
NN
Sbjct: 66 NN 67
>UniRef50_Q11XR3 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 401
Score = 33.1 bits (72), Expect = 3.7
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -2
Query: 413 NVQCVIISSESYVRFLLTI-RPDECVDFSNIYIIEFLDCSLDMVLVCTCVNNKDKVLLSS 237
N+ + +S+ S + L P +D SNI +E+L+CS L C+N D++ +S
Sbjct: 274 NLSVIDVSANSNITLLFCYSNPITTLDVSNITNLEYLNCSSCPNLSTVCINTTDQLKSTS 333
Query: 236 IFFIAAS 216
++ + S
Sbjct: 334 SWWWSKS 340
>UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L23 - Lentisphaera araneosa HTCC2155
Length = 93
Score = 33.1 bits (72), Expect = 3.7
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
F V +SANK I AV+K++++ V VNT+ GKKK
Sbjct: 28 FKVASSANKIEIANAVQKIFNVKVQSVNTM-NYTGKKK 64
>UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 120
Score = 33.1 bits (72), Expect = 3.7
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 347
++F S K IK +K LYD+NV KVNT+
Sbjct: 41 IMFKTDCSVGKTDIKTYMKALYDVNVDKVNTI 72
>UniRef50_Q4PG94 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 646
Score = 33.1 bits (72), Expect = 3.7
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKK-LYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKI 425
L+ I+HTSA H I +K L D ++ K I+ D ++L RDY A+D N +
Sbjct: 240 LILIIHTSAMSHRIPPLLKHILQDPSIVKTGVAIKNDA-----LKLQRDY-AIDARNVV 292
>UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36;
Bacteria|Rep: 50S ribosomal protein L23 -
Propionibacterium acnes
Length = 102
Score = 33.1 bits (72), Expect = 3.7
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 353
F+V +ANK IK A+++++ + V VNT+ R
Sbjct: 33 FVVKPTANKTEIKIAIEQIFGVKVTSVNTMNR 64
>UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Emiliania huxleyi|Rep: Chloroplast 50S ribosomal
protein L23 - Emiliania huxleyi
Length = 99
Score = 33.1 bits (72), Expect = 3.7
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
F V A+K IK+AV+ L+D+ V VNT +P K++
Sbjct: 32 FAVDRKADKISIKSAVEALFDVQVVAVNTANQPLKKRR 69
>UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16;
Actinomycetales|Rep: 50S ribosomal protein L23 -
Streptomyces coelicolor
Length = 139
Score = 32.7 bits (71), Expect = 4.8
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
F+V +NK IK AV+ ++ + V VNT+ R GK+K
Sbjct: 70 FVVAPGSNKTQIKEAVQAVFSVKVTGVNTINR-QGKRK 106
>UniRef50_Q8DEX8 Cluster: Secreted trypsin-like serine protease;
n=6; Vibrio|Rep: Secreted trypsin-like serine protease -
Vibrio vulnificus
Length = 386
Score = 32.7 bits (71), Expect = 4.8
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 136 HPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLSLLFTQVQTSTISRLQSR 309
HPKY R + K+N D+Y ++ L S+ A+ ++ T + L + +S ++SR
Sbjct: 99 HPKYTRLTEYKKNNDDSYTLVSTSLDSDVALLYLDRPVTGAPLSDLPTAAEMSEIESR 156
>UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1;
Bacteroides capillosus ATCC 29799|Rep: 50S ribosomal
protein L23 - Bacteroides capillosus ATCC 29799
Length = 99
Score = 32.7 bits (71), Expect = 4.8
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 371
F V SANK I AV++++ + V KVNTL GK+K
Sbjct: 29 FEVAKSANKIEIAKAVEEIFGVKVVKVNTL-NMQGKEK 65
>UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7;
Bacilli|Rep: 50S ribosomal protein L23 - Lactococcus
lactis subsp. cremoris (strain SK11)
Length = 97
Score = 32.7 bits (71), Expect = 4.8
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDGKK 368
F V + A+K IK AV+ ++D+ VA VNT+ ++P K+
Sbjct: 27 FEVDSRAHKLLIKQAVEAVFDVKVASVNTISVKPKSKR 64
>UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Stigeoclonium helveticum|Rep: Chloroplast 50S
ribosomal protein L23 - Stigeoclonium helveticum (Green
alga)
Length = 118
Score = 32.7 bits (71), Expect = 4.8
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 255 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 398
+F V K IK +++ +++NV VNT RP KK+ Y++ + Y
Sbjct: 25 MFNVDLRLTKPQIKKLIEQYFEVNVISVNT-HRPPRKKRLYIQTSPGY 71
>UniRef50_Q4N6P3 Cluster: Ribosomal protein L223, putative; n=2;
Theileria|Rep: Ribosomal protein L223, putative -
Theileria parva
Length = 252
Score = 32.3 bits (70), Expect = 6.4
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR-PDGKKKAYVRLARDY 398
L V + K I+ ++KLYD V KVNTLI+ P K+ RL + Y
Sbjct: 38 LALRVPINLTKFEIREYLRKLYDAKVIKVNTLIKIPRIKRDFSSRLPKYY 87
>UniRef50_UPI0000E49786 Cluster: PREDICTED: similar to NUP153
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to NUP153 protein -
Strongylocentrotus purpuratus
Length = 1708
Score = 31.9 bits (69), Expect = 8.5
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Frame = +1
Query: 16 PVTKALKAQRKVVKGEHGKRVR-KIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYN 192
P+T + A+ V + + G +++ K R+++H+ K E P P +LP + ++
Sbjct: 465 PITSSTPAEGPVGREKTGGKMKSKSRHTMHYSAQKADEECEIPDLPELALPLPKGLPTFS 524
Query: 193 IIKFPLTSEAAMKKIEDNNT------LSLLFTQVQTSTISRLQS 306
LTS +++ K ++T + LL + TS+ SR S
Sbjct: 525 F--GSLTSSSSISKPSSSSTAASTMGIGLLSSSSSTSSTSRSSS 566
>UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26;
Firmicutes|Rep: 50S ribosomal protein L23 - Clostridium
acetobutylicum
Length = 98
Score = 31.9 bits (69), Expect = 8.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNT 344
FIV ANK IK A+++++ + V KVNT
Sbjct: 29 FIVDPHANKVQIKKAIEEVFGVKVEKVNT 57
>UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
synoviae 53|Rep: 50S ribosomal protein L23 - Mycoplasma
synoviae (strain 53)
Length = 158
Score = 31.9 bits (69), Expect = 8.5
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLA 389
F V ANKH IK AV+ ++ + V VNT I+ K K R A
Sbjct: 27 FKVDYFANKHQIKQAVETIFKVEVVDVNT-IKVGKKPKKLGRFA 69
>UniRef50_Q6LF56 Cluster: Splicing factor 3a subunit, putative; n=5;
Plasmodium|Rep: Splicing factor 3a subunit, putative -
Plasmodium falciparum (isolate 3D7)
Length = 233
Score = 31.9 bits (69), Expect = 8.5
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARD-YDALDVANK 422
++ HT KH + A + L + N N L +P + + V++ + YD V NK
Sbjct: 69 YLCHTQGKKHQMNLAQRLLKEKNEMTTNRLNKPVSEPRKIVKIGKPRYDVTRVRNK 124
>UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55;
Alphaproteobacteria|Rep: 50S ribosomal protein L23 -
Silicibacter pomeroyi
Length = 98
Score = 31.9 bits (69), Expect = 8.5
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 377
+VF V +NK IK AV+ L+ + V VNT I GK K +
Sbjct: 29 VVFEVSIDSNKPQIKEAVESLFGVKVKAVNTTI-TKGKVKRF 69
>UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:
Mucin-16 - Homo sapiens (Human)
Length = 22152
Score = 31.9 bits (69), Expect = 8.5
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 190 NIIKFPLTSEAAMKKIEDNNTLSLLFTQVQTSTISRLQS 306
+I+ + +AMKKIE T SL+F +TST ++ S
Sbjct: 6343 SIVSTSMPRSSAMKKIESETTFSLIFRLRETSTSQKIGS 6381
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,029,507
Number of Sequences: 1657284
Number of extensions: 8240987
Number of successful extensions: 25358
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 24609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25322
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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