Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0406
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    25   0.51 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.3  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.3  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 470 VNFYS*KIWNSLYDANFVGNVQCVIIS 390
           V+FY      S Y  NF G++Q +IIS
Sbjct: 110 VHFYYPVATMSFYVLNFFGSIQFIIIS 136


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = -3

Query: 172 FS*AETSLGI*GA*EVQTSWVCGNAQSCEFS 80
           F      + + G   + T W+C     C+FS
Sbjct: 717 FKITSVMIAVSGLVYIATVWICTLMNRCKFS 747


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 183 IHAISLRQRLPWVF 142
           +HAI++R    W F
Sbjct: 91  VHAITIRSTFSWTF 104


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/35 (25%), Positives = 13/35 (37%)
 Frame = -1

Query: 180 HAISLRQRLPWVFRVPRRFKRLGSAEMHRVANFPY 76
           H +    +L W   V    + L   E+     FPY
Sbjct: 184 HGLETLNQLIWFDEVVNELRILHGVEIRDYPKFPY 218


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 417 NKIGII*TVPYFL 455
           +KIGI+ TV YF+
Sbjct: 35  SKIGIVQTVAYFV 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,195
Number of Sequences: 336
Number of extensions: 2159
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)