Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0406
(504 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 109 4e-24
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 109 4e-24
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 109 4e-24
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 109 4e-24
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 109 4e-24
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 109 4e-24
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 107 2e-23
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 102 6e-22
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 102 6e-22
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 102 6e-22
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 102 6e-22
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 92 1e-18
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 82 9e-16
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 82 9e-16
BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein. 81 2e-15
BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein. 81 2e-15
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 51 3e-06
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 51 3e-06
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 51 3e-06
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 51 3e-06
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 51 3e-06
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 51 3e-06
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 51 3e-06
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 47 3e-05
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 47 3e-05
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 47 3e-05
AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens ... 43 7e-04
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 32 1.3
BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein. 30 5.3
AK001237-1|BAA91573.1| 589|Homo sapiens protein ( Homo sapiens ... 30 5.3
AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility as... 29 9.2
AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protei... 29 9.2
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 109 bits (263), Expect = 4e-24
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E+AMKKIEDNNTL
Sbjct: 80 PLTTESAMKKIEDNNTL 96
Score = 108 bits (259), Expect = 1e-23
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 109 bits (263), Expect = 4e-24
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E+AMKKIEDNNTL
Sbjct: 80 PLTTESAMKKIEDNNTL 96
Score = 108 bits (259), Expect = 1e-23
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 109 bits (263), Expect = 4e-24
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E+AMKKIEDNNTL
Sbjct: 71 PLTTESAMKKIEDNNTL 87
Score = 108 bits (259), Expect = 1e-23
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGI
Sbjct: 87 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 146
Query: 432 I 434
I
Sbjct: 147 I 147
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 109 bits (263), Expect = 4e-24
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E+AMKKIEDNNTL
Sbjct: 80 PLTTESAMKKIEDNNTL 96
Score = 108 bits (259), Expect = 1e-23
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 109 bits (263), Expect = 4e-24
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E+AMKKIEDNNTL
Sbjct: 80 PLTTESAMKKIEDNNTL 96
Score = 108 bits (259), Expect = 1e-23
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 109 bits (263), Expect = 4e-24
Identities = 51/77 (66%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E+AMKKIEDNNTL
Sbjct: 80 PLTTESAMKKIEDNNTL 96
Score = 108 bits (259), Expect = 1e-23
Identities = 53/61 (86%), Positives = 55/61 (90%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 107 bits (258), Expect = 2e-23
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y II F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E+AMKKIEDNNTL
Sbjct: 80 PLTTESAMKKIEDNNTL 96
Score = 106 bits (254), Expect = 5e-23
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVFIV ANKH I AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DYDALDVANKIGI
Sbjct: 96 LVFIVDVKANKHQISQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 102 bits (245), Expect = 6e-22
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E AMKKI+DNNTL
Sbjct: 80 PLTTEFAMKKIKDNNTL 96
Score = 46.0 bits (104), Expect = 8e-05
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 350
LVF V ANKH IK AVKKL DI+ AKVNTL+
Sbjct: 96 LVFTVDVKANKHQIKQAVKKLCDIDGAKVNTLM 128
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 102 bits (245), Expect = 6e-22
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E AMKKI+DNNTL
Sbjct: 80 PLTTEFAMKKIKDNNTL 96
Score = 46.0 bits (104), Expect = 8e-05
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 350
LVF V ANKH IK AVKKL DI+ AKVNTL+
Sbjct: 96 LVFTVDVKANKHQIKQAVKKLCDIDGAKVNTLM 128
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 102 bits (245), Expect = 6e-22
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E AMKKI+DNNTL
Sbjct: 80 PLTTEFAMKKIKDNNTL 96
Score = 46.0 bits (104), Expect = 8e-05
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 350
LVF V ANKH IK AVKKL DI+ AKVNTL+
Sbjct: 96 LVFTVDVKANKHQIKQAVKKLCDIDGAKVNTLM 128
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 102 bits (245), Expect = 6e-22
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = +1
Query: 25 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 204
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 205 PLTSEAAMKKIEDNNTL 255
PLT+E AMKKI+DNNTL
Sbjct: 80 PLTTEFAMKKIKDNNTL 96
Score = 46.0 bits (104), Expect = 8e-05
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 350
LVF V ANKH IK AVKKL DI+ AKVNTL+
Sbjct: 96 LVFTVDVKANKHQIKQAVKKLCDIDGAKVNTLM 128
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 91.9 bits (218), Expect = 1e-18
Identities = 44/88 (50%), Positives = 61/88 (69%)
Frame = +1
Query: 7 EVKPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 186
E + KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++
Sbjct: 14 EAEAKAKALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGH 73
Query: 187 YNIIKFPLTSEAAMKKIEDNNTLSLLFT 270
Y +IKFPLT+E+A+K+ E+NNT LLFT
Sbjct: 74 YAVIKFPLTTESAVKRTEENNT--LLFT 99
Score = 91.5 bits (217), Expect = 2e-18
Identities = 46/61 (75%), Positives = 50/61 (81%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
L+F V ANKH IK AVKKLYD +VA+V TLI PDG+KKA VRLA DYDALDVANKIGI
Sbjct: 96 LLFTVDVKANKHQIKQAVKKLYDGDVAEVTTLIPPDGEKKACVRLAPDYDALDVANKIGI 155
Query: 432 I 434
I
Sbjct: 156 I 156
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 82.2 bits (194), Expect = 9e-16
Identities = 40/59 (67%), Positives = 45/59 (76%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIG 428
LVF V ANKH I+ AVKKLYD +VAKV TLI PD +KKAYVRLA DYDA +V K+G
Sbjct: 55 LVFTVDVKANKHQIRQAVKKLYDSDVAKVTTLICPDKEKKAYVRLAPDYDAFNVVTKLG 113
Score = 77.8 bits (183), Expect = 2e-14
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = +1
Query: 94 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 255
S+ FRRPKT R P+YP+KS P+RN++ Y IIKFPLT+E+A+KKIE+NNTL
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLTTESAVKKIEENNTL 55
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 82.2 bits (194), Expect = 9e-16
Identities = 40/59 (67%), Positives = 44/59 (74%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIG 428
LVF V ANKH I+ AVKKLYD +VAKV TLI PD + KAYVRLA DYDA DV K+G
Sbjct: 55 LVFTVDVKANKHQIRQAVKKLYDSDVAKVTTLICPDKENKAYVRLAPDYDAFDVVTKLG 113
Score = 77.4 bits (182), Expect = 3e-14
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = +1
Query: 94 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTL 255
S+ FRRPKT R P+YPRKS P+RN++ Y IIKFPL +E+A+KKIE+NNTL
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLATESAVKKIEENNTL 55
>BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 81.0 bits (191), Expect = 2e-15
Identities = 46/72 (63%), Positives = 54/72 (75%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVF V+ ANKH KKLYD +VAKVNTLIRPDG+K+ +VRLA DY+ALDVANKIGI
Sbjct: 10 LVFTVNVKANKHQ-----KKLYDTDVAKVNTLIRPDGEKE-HVRLAPDYNALDVANKIGI 63
Query: 432 I*TVPYFLRIKI 467
I T +L + I
Sbjct: 64 ISTESSWLILNI 75
>BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 81.0 bits (191), Expect = 2e-15
Identities = 46/72 (63%), Positives = 54/72 (75%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVF V+ ANKH KKLYD +VAKVNTLIRPDG+K+ +VRLA DY+ALDVANKIGI
Sbjct: 10 LVFTVNVKANKHQ-----KKLYDTDVAKVNTLIRPDGEKE-HVRLAPDYNALDVANKIGI 63
Query: 432 I*TVPYFLRIKI 467
I T +L + I
Sbjct: 64 ISTESSWLILNI 75
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 3e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 45
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 364 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 423
Query: 44 L*ALSALVTGF 12
AL +L GF
Sbjct: 424 FLALQSLRFGF 434
>AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ43284 fis, clone LYMPB2000083, highly similar
to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
PRECURSOR. ).
Length = 349
Score = 42.7 bits (96), Expect = 7e-04
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -2
Query: 224 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 84
A S V GNLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 260 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 306
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.9 bits (69), Expect = 1.3
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 190 NIIKFPLTSEAAMKKIEDNNTLSLLFTQVQTSTISRLQS 306
+I+ + +AMKKIE T SL+F +TST ++ S
Sbjct: 6343 SIVSTSMPRSSAMKKIESETTFSLIFRLRETSTSQKIGS 6381
>BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein.
Length = 392
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 130 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 243
P+ YP KSL +R I FPL A+KK+ED
Sbjct: 69 PQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLED 106
>AK001237-1|BAA91573.1| 589|Homo sapiens protein ( Homo sapiens
cDNA FLJ10375 fis, clone NT2RM2001950. ).
Length = 589
Score = 29.9 bits (64), Expect = 5.3
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 130 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 243
P+ YP KSL +R I FPL A+KK+ED
Sbjct: 76 PQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLED 113
>AY557611-1|AAT52049.1| 1844|Homo sapiens chromosome fragility
associated gene 1 protein.
Length = 1844
Score = 29.1 bits (62), Expect = 9.2
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 67 GKRVRKIRNSVHFRRPKTFEPPRHPKY--PRKSLPKRNRMDAYNIIKFPLTSEAAMKKIE 240
GK +KI + PP PK P+++LP + + + + P +E +E
Sbjct: 1199 GKSPKKISSPKKVVTSPRKVPPPSPKSSGPKRALPPKTLANYFKVSPKPKNNEEIGMLLE 1258
Query: 241 DNNTLSLLFTQVQTSTISRLQSRNSMI 321
+N + F Q Q + + NS +
Sbjct: 1259 NNKGIKNSFEQKQITQTKSTNATNSNV 1285
>AJ314648-1|CAC44537.2| 1844|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 1844
Score = 29.1 bits (62), Expect = 9.2
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 67 GKRVRKIRNSVHFRRPKTFEPPRHPKY--PRKSLPKRNRMDAYNIIKFPLTSEAAMKKIE 240
GK +KI + PP PK P+++LP + + + + P +E +E
Sbjct: 1199 GKSPKKISSPKKVVTSPRKVPPPSPKSSGPKRALPPKTLANYFKVSPKPKNNEEIGMLLE 1258
Query: 241 DNNTLSLLFTQVQTSTISRLQSRNSMI 321
+N + F Q Q + + NS +
Sbjct: 1259 NNKGIKNSFEQKQITQTKSTNATNSNV 1285
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,578,493
Number of Sequences: 237096
Number of extensions: 1308783
Number of successful extensions: 3144
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3136
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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