Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0406
(504 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 128 3e-30
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 128 3e-30
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 128 4e-30
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 122 3e-28
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 35 0.054
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 29 4.7
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 29 4.7
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 29 4.7
AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p pro... 29 4.7
AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like p... 29 4.7
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 29 4.7
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 29 4.7
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 29 4.7
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 29 4.7
AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-P... 29 4.7
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 128 bits (310), Expect = 3e-30
Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 6/129 (4%)
Frame = +1
Query: 28 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 207
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 208 LTSEAAMKKIEDNNTLSLLF------TQVQTSTISRLQSRNSMI*MLLKSTHSSGLMVRR 369
LT+EAAMKKIEDNNTL L V+ + + + + +L++ VR
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 370 KRTYDSLEI 396
R YD+L+I
Sbjct: 254 ARDYDALDI 262
Score = 108 bits (259), Expect = 5e-24
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRLARDYDALD+ANKIGI
Sbjct: 209 LVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGI 268
Query: 432 I 434
I
Sbjct: 269 I 269
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 128 bits (310), Expect = 3e-30
Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 6/129 (4%)
Frame = +1
Query: 28 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 207
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 208 LTSEAAMKKIEDNNTLSLLF------TQVQTSTISRLQSRNSMI*MLLKSTHSSGLMVRR 369
LT+EAAMKKIEDNNTL L V+ + + + + +L++ VR
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 370 KRTYDSLEI 396
R YD+L+I
Sbjct: 262 ARDYDALDI 270
Score = 108 bits (259), Expect = 5e-24
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRLARDYDALD+ANKIGI
Sbjct: 217 LVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGI 276
Query: 432 I 434
I
Sbjct: 277 I 277
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 128 bits (309), Expect = 4e-30
Identities = 66/129 (51%), Positives = 85/129 (65%), Gaps = 6/129 (4%)
Frame = +1
Query: 28 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 207
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 208 LTSEAAMKKIEDNNTLSLLF------TQVQTSTISRLQSRNSMI*MLLKSTHSSGLMVRR 369
LT+EAAMKKIEDNNTL L + V+ + + + + +L++ VR
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 370 KRTYDSLEI 396
R YD+L+I
Sbjct: 262 ARDYDALDI 270
Score = 107 bits (257), Expect = 8e-24
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVF+ H ANK H++AAV+KLYDI VAKVN LIRPDG+KKAYVRLARDYDALD+ANKIGI
Sbjct: 217 LVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGI 276
Query: 432 I 434
I
Sbjct: 277 I 277
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 122 bits (294), Expect = 3e-28
Identities = 65/129 (50%), Positives = 83/129 (64%), Gaps = 6/129 (4%)
Frame = +1
Query: 28 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 207
A K Q+K++K G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 208 LTSEAAMKKIEDNNTLSLLF------TQVQTSTISRLQSRNSMI*MLLKSTHSSGLMVRR 369
LT+EAAMKKIEDNNTL L V+ + + + + +L++ VR
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 370 KRTYDSLEI 396
R YD+L+I
Sbjct: 254 ARDYDALDI 262
Score = 108 bits (259), Expect = 5e-24
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +3
Query: 252 LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDALDVANKIGI 431
LVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRLARDYDALD+ANKIGI
Sbjct: 209 LVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRLARDYDALDIANKIGI 268
Query: 432 I 434
I
Sbjct: 269 I 269
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 35.1 bits (77), Expect = 0.054
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 144 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLVFIVHTSANKHHIKA 299
+P+E+ A ++ HG +QHH +P+ +EED R Q + HT A + +A
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEED-RGQQHPGLPHTPARQQEPRA 213
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 278 KQAPYQGCSQETL*YKCC*SQHTHQA*W*EESVXXXXXXXXXIGRCQQNWHHINCSI 448
+Q P S + L ++ + H A W EE + G CQQ+ HHI+ +I
Sbjct: 208 QQEPRACRSAQALRHQGGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264
>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
protein.
Length = 1638
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 243
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein.
Length = 1634
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 243
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1420 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein.
Length = 1638
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 243
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p protein.
Length = 1010
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +1
Query: 10 VKPVTKALKAQRKVVKGEHGKRVRK------IRNSVHFRRPKTFEPPRHPKYPRKSLPKR 171
+ + K ++ + +V+ RVR+ I+N +H + EPP HP+ KS K
Sbjct: 902 INRLVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAHPRSADKSSKKL 961
Query: 172 NRMD 183
++ +
Sbjct: 962 SKKE 965
>AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like
protein protein.
Length = 1010
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +1
Query: 10 VKPVTKALKAQRKVVKGEHGKRVRK------IRNSVHFRRPKTFEPPRHPKYPRKSLPKR 171
+ + K ++ + +V+ RVR+ I+N +H + EPP HP+ KS K
Sbjct: 902 INRLVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAHPRSADKSSKKL 961
Query: 172 NRMD 183
++ +
Sbjct: 962 SKKE 965
>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
isoform B protein.
Length = 1638
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 243
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
isoform A protein.
Length = 1638
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 243
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
isoform D protein.
Length = 1634
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 243
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1420 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
isoform C protein.
Length = 1634
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 70 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 243
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1420 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-PA
protein.
Length = 1010
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +1
Query: 10 VKPVTKALKAQRKVVKGEHGKRVRK------IRNSVHFRRPKTFEPPRHPKYPRKSLPKR 171
+ + K ++ + +V+ RVR+ I+N +H + EPP HP+ KS K
Sbjct: 902 INRLVKVVEMRNEVIDSLETDRVREAREDMSIKNRLHIYNSEREEPPAHPRSADKSSKKL 961
Query: 172 NRMD 183
++ +
Sbjct: 962 SKKE 965
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,487,757
Number of Sequences: 53049
Number of extensions: 402831
Number of successful extensions: 1286
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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