Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0403
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.7  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 45  ILCPYNMCKRFIV*LRFNLCRLSVFENVPDTLYVS 149
           +LC Y  C+ FI+      C  S++  +  T Y++
Sbjct: 295 LLCIYYFCRAFIIFPTHFYCAFSLYP-LKSTFYLN 328


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -3

Query: 172 PNRMADLVDTYSVSGTFSKTDRRHKLNL 89
           P     L    SV  +FS   RRH +NL
Sbjct: 214 PQETPVLASYKSVPMSFSSPRRRHSINL 241


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 424 WHICYRPRNAS 392
           +++C+RPRN S
Sbjct: 401 YNVCFRPRNNS 411


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 195 FPQPSKKDQTEWLTSSIRTAYP 130
           FP P K D   +L  +I+  +P
Sbjct: 401 FPDPEKFDPDRFLPENIQKRHP 422


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 195 FPQPSKKDQTEWLTSSIRTAYP 130
           FP P K D   +L  +I+  +P
Sbjct: 401 FPDPEKFDPDRFLPENIQKRHP 422


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 87  LRFNLCRLSVFENVPDTLY 143
           LRF L  LS+F  VP  LY
Sbjct: 317 LRFCLNILSIFTYVPMILY 335


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 87  LRFNLCRLSVFENVPDTLY 143
           LRF L  LS+F  VP  LY
Sbjct: 42  LRFCLNILSIFTYVPMILY 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,465
Number of Sequences: 336
Number of extensions: 2204
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)