Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0400
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        27   0.66 
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    24   3.5  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   3.5  

>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 236 SQLIASLNDVIQNYKKQKQTNILTT 310
           SQ +  L D +  YK+Q+Q N+L T
Sbjct: 101 SQAVPKLQDDLLQYKQQQQQNLLIT 125


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 6/20 (30%), Positives = 16/20 (80%)
 Frame = -3

Query: 222 MYIQRDFIHFVKRFSSWSFR 163
           +YI+RD++ F++++ ++  R
Sbjct: 79  LYIRRDYLQFIRKYDTFEKR 98


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 511 FYCCSGDNELVNFS 552
           F CCSGDN   NFS
Sbjct: 143 FCCCSGDNCNGNFS 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,674
Number of Sequences: 2352
Number of extensions: 10209
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)