Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0398
(553 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 23 1.3
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 22 3.1
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 5.4
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 5.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.2
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 7.2
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 7.2
DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory pro... 21 9.5
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.4 bits (48), Expect = 1.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 148 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRLTNL 267
H+P A + LP+GA L ++ G+V +A G L L
Sbjct: 35 HSPCATGSN-GLPAGAGSNLLCASNGLVTTLASGSSLNGL 73
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 22.2 bits (45), Expect = 3.1
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 25 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 135
VG + EG L E +GD G+L AS +FA
Sbjct: 91 VGTALTFCLQEEGGTTSQLIELLGDAGKLL-ASVHFA 126
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 5.4
Identities = 5/11 (45%), Positives = 7/11 (63%)
Frame = +3
Query: 123 WKLRHCDWTQS 155
W HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.4 bits (43), Expect = 5.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -3
Query: 203 TFLAPDGSFTLVR 165
T PDG FT++R
Sbjct: 579 TVTVPDGGFTIIR 591
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 381 DGYHHREDALQGSWQHHVHMASS 313
D Y HR ++LQ +++V SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 381 DGYHHREDALQGSWQHHVHMASS 313
D Y HR ++LQ +++V SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 381 DGYHHREDALQGSWQHHVHMASS 313
D Y HR ++LQ +++V SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 381 DGYHHREDALQGSWQHHVHMASS 313
D Y HR ++LQ +++V SS
Sbjct: 1532 DNYDHRRNSLQMQQRNNVTWKSS 1554
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 535 YRFLIDLIII*VSFFVSVLPPRILPVL 455
+ +LI + VS +S+ PP ++P L
Sbjct: 543 FGYLISCVSRSVSMALSIGPPLVIPFL 569
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 535 YRFLIDLIII*VSFFVSVLPPRILPVL 455
+ +LI + VS +S+ PP ++P L
Sbjct: 543 FGYLISCVSRSVSMALSIGPPLVIPFL 569
>DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory
protein 19 protein.
Length = 119
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/25 (32%), Positives = 11/25 (44%)
Frame = +2
Query: 209 HQATEAWSVLLLEVDD*QTYFESWK 283
H + W L + D YFE +K
Sbjct: 90 HNKQQMWKELTAKYDPDGIYFEKYK 114
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,379
Number of Sequences: 336
Number of extensions: 3005
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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