Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0397
(728 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 139 7e-32
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 121 2e-26
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 118 1e-25
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 116 6e-25
UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metaz... 116 8e-25
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 101 2e-20
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 97 3e-19
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 93 6e-18
UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10; Trypa... 93 8e-18
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 91 2e-17
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 91 3e-17
UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;... 91 3e-17
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 84 3e-15
UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n... 84 4e-15
UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=... 84 4e-15
UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S riboso... 82 2e-14
UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n... 81 2e-14
UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n... 74 3e-12
UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, wh... 74 3e-12
UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27; Archa... 73 1e-11
UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast ... 72 1e-11
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 72 2e-11
UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000... 71 2e-11
UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S riboso... 69 9e-11
UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2; Crypto... 69 1e-10
UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1; Guilla... 67 4e-10
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 67 4e-10
UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 67 4e-10
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 61 2e-08
UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivi... 60 5e-08
UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2; Methan... 60 5e-08
UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000... 58 2e-07
UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S riboso... 56 7e-07
UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2; environ... 56 7e-07
UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2; Methan... 56 9e-07
UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4; Haloba... 54 4e-06
UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5; T... 53 6e-06
UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 53 8e-06
UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2; Thermo... 50 4e-05
UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1; Methan... 48 2e-04
UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12; Proteo... 46 0.001
UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candida... 45 0.002
UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4; Methan... 45 0.002
UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candida... 44 0.005
UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8; Gammapr... 43 0.007
UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58; Proteo... 43 0.007
UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59; Gammap... 42 0.012
UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8; Francis... 42 0.015
UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10; Bacter... 42 0.015
UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2; Methano... 41 0.027
UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1; Lentisp... 40 0.062
UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14; Clostr... 40 0.062
UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36; Bacter... 40 0.082
UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2; ... 39 0.11
UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellul... 39 0.11
UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11; Bacter... 39 0.11
UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;... 39 0.14
UniRef50_Q7VKD4 Cluster: 50S ribosomal protein L23; n=27; Gammap... 39 0.14
UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23; ... 39 0.14
UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23; ... 39 0.14
UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7; Bactero... 38 0.33
UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candida... 37 0.44
UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orienti... 37 0.44
UniRef50_A0RVX6 Cluster: 50S ribosomal protein L23; n=1; Cenarch... 37 0.44
UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7; Bacteri... 37 0.44
UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16; Actino... 37 0.58
UniRef50_Q7MTL5 Cluster: 50S ribosomal protein L23; n=8; Bactero... 37 0.58
UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23; ... 37 0.58
UniRef50_Q11XR3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.77
UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23; Firmic... 36 0.77
UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3; Bacteri... 36 1.0
UniRef50_Q6YR18 Cluster: 50S ribosomal protein L23; n=3; Candida... 36 1.3
UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candida... 36 1.3
UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 36 1.3
UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11; Bacter... 35 1.8
UniRef50_Q4N6P3 Cluster: Ribosomal protein L223, putative; n=2; ... 35 1.8
UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55; Alphap... 35 1.8
UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23; ... 35 1.8
UniRef50_A7TL58 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q1VLV7 Cluster: 50S ribosomal protein L23; n=2; Flavoba... 34 3.1
UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1; Psychro... 34 3.1
UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 34 3.1
UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7; Bacilli... 34 3.1
UniRef50_Q241C6 Cluster: Phage head-tail adaptor, putative famil... 34 4.1
UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14; Bacter... 34 4.1
UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces cere... 33 7.2
UniRef50_Q7NPG8 Cluster: 50S ribosomal protein L23; n=7; cellula... 33 7.2
UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1; Maripro... 33 9.5
UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1; Bactero... 33 9.5
UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellul... 33 9.5
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 139 bits (336), Expect = 7e-32
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +2
Query: 302 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 481
PV KALK Q+KVVKGEHGKRVRKIR SVHFRRPKTFEPPR+PKYPRKSLPKRNRMDAYNI
Sbjct: 151 PVVKALKIQKKVVKGEHGKRVRKIRTSVHFRRPKTFEPPRNPKYPRKSLPKRNRMDAYNI 210
Query: 482 IKFPLTSEA 508
IK+PLTSEA
Sbjct: 211 IKYPLTSEA 219
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 121 bits (292), Expect = 2e-26
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +2
Query: 302 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 481
PV KALKAQ+K++KG G RVRKIR SVHF RPKTF PPR+PKYPRKS+P RNRMDA NI
Sbjct: 108 PVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAVNI 167
Query: 482 IKFPLTSEAQ*RRLK 526
IKFPLT+EA ++++
Sbjct: 168 IKFPLTTEAAMKKIE 182
Score = 121 bits (291), Expect = 2e-26
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
+ MKKIEDNNTLVFIVHT ANK+HIK++VKKLYD++V KVNTLIRPDGKKKAYVRL RDY
Sbjct: 176 AAMKKIEDNNTLVFIVHTRANKYHIKSSVKKLYDVDVLKVNTLIRPDGKKKAYVRLTRDY 235
Query: 685 DAWTLPTKLGIL 720
DA + K+GI+
Sbjct: 236 DALDVANKIGII 247
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 118 bits (284), Expect = 1e-25
Identities = 52/69 (75%), Positives = 59/69 (85%)
Frame = +2
Query: 302 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 481
PV KAL Q+KV+KG G R RKIRNSVHF RPKTF PPR+PKYPRKS+P R+RMDAYNI
Sbjct: 141 PVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPRKSVPTRSRMDAYNI 200
Query: 482 IKFPLTSEA 508
IK+PLT+EA
Sbjct: 201 IKYPLTTEA 209
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 116 bits (279), Expect = 6e-25
Identities = 56/72 (77%), Positives = 61/72 (84%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
S MKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DY
Sbjct: 85 SAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDY 144
Query: 685 DAWTLPTKLGIL 720
DA + K+GI+
Sbjct: 145 DALDVANKIGII 156
Score = 88.6 bits (210), Expect = 1e-16
Identities = 40/72 (55%), Positives = 54/72 (75%)
Frame = +2
Query: 311 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 490
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 491 PLTSEAQ*RRLK 526
PLT+E+ ++++
Sbjct: 80 PLTTESAMKKIE 91
>UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metazoa
group|Rep: 60S ribosomal protein - Oncorhynchus mykiss
(Rainbow trout) (Salmo gairdneri)
Length = 96
Score = 116 bits (278), Expect = 8e-25
Identities = 56/72 (77%), Positives = 61/72 (84%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
S MKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTLIRPDG+KKAYVRLA DY
Sbjct: 25 SAMKKIEDNNTLVFIVDVKANKHQIKHAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDY 84
Query: 685 DAWTLPTKLGIL 720
DA + K+GI+
Sbjct: 85 DALDVANKIGII 96
Score = 39.9 bits (89), Expect = 0.062
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +2
Query: 434 PRKSLPKRNRMDAYNIIKFPLTSEAQ*RRLK 526
PRKS +RN++D Y IIKFPLT+E+ ++++
Sbjct: 1 PRKSASRRNKLDHYAIIKFPLTTESAMKKIE 31
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 101 bits (241), Expect = 2e-20
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
S MKKIEDNNTLVFIV A+K IK AVKK+YDI KVNTLIRPDG KKAYVRL DY
Sbjct: 84 SAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQSKKVNTLIRPDGTKKAYVRLTPDY 143
Query: 685 DAWTLPTKLGIL 720
DA + K+GI+
Sbjct: 144 DALDVANKIGII 155
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = +2
Query: 302 PVTKALKAQRKVVKGEH---GKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 472
P +ALKA + V G + K +KIR V F RPKTF+ R+PKYPR S RN++D
Sbjct: 13 PKAQALKAAKAVKSGSNILKKKASKKIRTKVTFHRPKTFKKERNPKYPRISATPRNKLDH 72
Query: 473 YNIIKFPLTSEAQ*RRLK 526
Y I+K+PLT+E+ ++++
Sbjct: 73 YQILKYPLTTESAMKKIE 90
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 97.5 bits (232), Expect = 3e-19
Identities = 47/72 (65%), Positives = 55/72 (76%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
S MKK DNNT VF+V ANKH IK AVK+LYDI++ KVNTLI PDG+KKAYV LA DY
Sbjct: 85 SAMKKTGDNNTRVFMVDVKANKHQIKQAVKRLYDIDMIKVNTLIWPDGEKKAYVPLAPDY 144
Query: 685 DAWTLPTKLGIL 720
DA + K+GI+
Sbjct: 145 DALDVANKIGII 156
Score = 83.4 bits (197), Expect = 5e-15
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = +2
Query: 311 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 490
KALKA++ V+KG H + +KI S FRRPKT + R PKYP KS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYPWKSTPRRNKLDHYAIIKF 79
Query: 491 PLTSEA 508
PLT+E+
Sbjct: 80 PLTTES 85
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 93.1 bits (221), Expect = 6e-18
Identities = 45/72 (62%), Positives = 55/72 (76%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
S +K+ E+NNTL+F V ANKH IK AVKKLYD +VA+V TLI PDG+KKA VRLA DY
Sbjct: 85 SAVKRTEENNTLLFTVDVKANKHQIKQAVKKLYDGDVAEVTTLIPPDGEKKACVRLAPDY 144
Query: 685 DAWTLPTKLGIL 720
DA + K+GI+
Sbjct: 145 DALDVANKIGII 156
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +2
Query: 311 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 490
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 491 PLTSEAQ*RRLKITTPWSLLFT 556
PLT+E+ +R + +LLFT
Sbjct: 80 PLTTESAVKRTEENN--TLLFT 99
>UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L23a -
Trypanosoma brucei brucei
Length = 164
Score = 92.7 bits (220), Expect = 8e-18
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = +1
Query: 511 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 690
MKKIE+NNTL FIV + ANK IK A++KLY + KVNTLIRPDG KKAY+RL+ YDA
Sbjct: 95 MKKIEENNTLTFIVDSRANKTEIKKAIRKLYQVKTVKVNTLIRPDGLKKAYIRLSASYDA 154
Query: 691 WTLPTKLGIL 720
K+G++
Sbjct: 155 LDTANKMGLV 164
Score = 36.7 bits (81), Expect = 0.58
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 365 RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAQ*RRLK 526
RK FRRP T+ P K +N+ DA+ II++PLT++ ++++
Sbjct: 46 RKAYTRPQFRRPHTYRRPATVKPSSNVSAIKNKWDAFRIIRYPLTTDKAMKKIE 99
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
+ MKK+ED N LVF V ANK+ IK AVK+LY+++V KVNTL+RP+G KKAYVRL DY
Sbjct: 71 TAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADY 130
Query: 685 DAWTLPTKLGIL 720
DA + ++G +
Sbjct: 131 DALDIANRIGYI 142
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/75 (44%), Positives = 50/75 (66%)
Frame = +2
Query: 302 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 481
P KA A++ VVKG +GK+ K+R S FR PKT + R PKY K++P NR+D+Y +
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKV 62
Query: 482 IKFPLTSEAQ*RRLK 526
I+ P+TSE ++++
Sbjct: 63 IEQPITSETAMKKVE 77
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 91.1 bits (216), Expect = 3e-17
Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +1
Query: 490 PSHV*STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 669
P + +KKIE+ NTLVFIV ANK IK A+KKLYDI+ K+NTLIRPDG KKA+ R
Sbjct: 79 PLNTEGALKKIEEQNTLVFIVDVKANKAQIKQALKKLYDIDTVKINTLIRPDGSKKAFAR 138
Query: 670 LARDYDAWTL-PTKLGIL 720
L D DA + TKLG++
Sbjct: 139 LTADVDALDIAATKLGLV 156
Score = 62.9 bits (146), Expect = 8e-09
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +2
Query: 311 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 490
+A KA + +KG H + K+R S F RPKT R PKYPRKS+P R+D + II
Sbjct: 19 QAKKAAQAALKGVHAHKRTKVRLSTTFHRPKTLVLSRAPKYPRKSVPHEPRLDEHKIIVH 78
Query: 491 PLTSEAQ*RRLK 526
PL +E ++++
Sbjct: 79 PLNTEGALKKIE 90
>UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;
n=2; Ostreococcus|Rep: RL23A_FRIAG 60S ribosomal protein
L23A - Ostreococcus tauri
Length = 259
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/72 (58%), Positives = 54/72 (75%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
+ + K E+NNTLVFIV ANK IK AVK++YDI+ AKVNTLIRP+G KKAY RL D+
Sbjct: 188 TALAKTENNNTLVFIVDARANKRQIKEAVKRMYDIDCAKVNTLIRPNGDKKAYCRLTADH 247
Query: 685 DAWTLPTKLGIL 720
DA + ++GI+
Sbjct: 248 DALDVANRIGII 259
Score = 33.9 bits (74), Expect = 4.1
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 17/76 (22%)
Frame = +2
Query: 305 VTKALKAQRKVVKGEHGKRVRK-IRNSVHFR----------------RPKTFEPPRHPKY 433
V KA KA + V KG GK ++K + H R RP+T + R P Y
Sbjct: 80 VNKASKAAKFVKKGAKGKLLKKRFSATFHSRETDHRERLTSDVLTVYRPRTLKHERKPAY 139
Query: 434 PRKSLPKRNRMDAYNI 481
PR S+P + ++D +++
Sbjct: 140 PRVSVPSKPKLDRFSV 155
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 84.2 bits (199), Expect = 3e-15
Identities = 42/72 (58%), Positives = 53/72 (73%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
+ MKKIEDN+TLVF+V ANK IKAAV+++Y I VAKVNTL P KKAYV+L D+
Sbjct: 133 AAMKKIEDNDTLVFVVDRRANKPAIKAAVQEMYKIKVAKVNTLNCPKNIKKAYVKLPPDF 192
Query: 685 DAWTLPTKLGIL 720
DA + K+GI+
Sbjct: 193 DALDVANKIGII 204
Score = 79.8 bits (188), Expect = 6e-14
Identities = 34/74 (45%), Positives = 53/74 (71%)
Frame = +2
Query: 305 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 484
V +ALKAQ+ + G H K +K+ ++ FRRPKT+ PPR PK R +PKRN++DA+ II
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPKTYRPPRCPKDRRFEIPKRNKLDAFRII 125
Query: 485 KFPLTSEAQ*RRLK 526
+ P+T+EA ++++
Sbjct: 126 RHPVTTEAAMKKIE 139
>UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n=2;
Theileria|Rep: 60S ribosomal protein L23a, putative -
Theileria parva
Length = 152
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/72 (56%), Positives = 51/72 (70%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
S MK IE+ NTLVF+V ANK + AV +LYDI VNTLIRPDG+KKA+VRL+ D
Sbjct: 81 SAMKMIEELNTLVFVVDPRANKAKVAKAVSQLYDITPVHVNTLIRPDGQKKAFVRLSPDQ 140
Query: 685 DAWTLPTKLGIL 720
DA + K+GI+
Sbjct: 141 DALDVANKIGII 152
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 311 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 487
KA A R V K K+V+ RN+ HF R +T R PKY +K ++D ++I++
Sbjct: 16 KAKLASRSVKKSTSVKKVKTRRNT-HFFRGRTLSLKRTPKYEKKVKTAYTKKLDKFSIVR 74
Query: 488 FPLTSEA 508
+PLT+E+
Sbjct: 75 YPLTTES 81
>UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L23, putative -
Babesia bovis
Length = 154
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/71 (57%), Positives = 51/71 (71%)
Frame = +1
Query: 508 TMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 687
+MK IE+ NTLVFIV + ANK I AV +LYD+ +VNTL RPDG KKAYVRL+ D D
Sbjct: 84 SMKMIEEINTLVFIVDSRANKEKIAKAVSELYDVKCVRVNTLNRPDGLKKAYVRLSPDQD 143
Query: 688 AWTLPTKLGIL 720
A + K+GI+
Sbjct: 144 ALDVANKIGII 154
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 311 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN-RMDAYNIIK 487
K K VK + KIR + HF R +T P+ PK R + + ++D ++IIK
Sbjct: 17 KQAKIAANSVKKSTTAKGYKIRRNTHFFRGRTLTLPKSPKVKRHLITAHSKKLDKFSIIK 76
Query: 488 FPLTSE 505
+PLT+E
Sbjct: 77 YPLTTE 82
>UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L23a - Homo sapiens
Length = 87
Score = 81.8 bits (193), Expect = 2e-14
Identities = 41/68 (60%), Positives = 46/68 (67%)
Frame = +1
Query: 511 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 690
MKKIEDNNTLVF V A KH IK AVKKLYD +VAKV+ LIRPD ++ +
Sbjct: 1 MKKIEDNNTLVFTVDVKATKHQIKQAVKKLYDTDVAKVHALIRPDAGRRHKLHWLLITML 60
Query: 691 WTLPTKLG 714
W LPTKLG
Sbjct: 61 WILPTKLG 68
>UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n=2;
Plasmodium chabaudi|Rep: 60S ribosomal protein L23a,
putative - Plasmodium chabaudi
Length = 147
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/70 (58%), Positives = 51/70 (72%)
Frame = +1
Query: 511 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 690
MKKIE+ NTLVFI A+K IK +VK L+DI AKVN L R +G KKAYVRL++D+DA
Sbjct: 78 MKKIEEINTLVFICDKRADKRKIKKSVKSLFDIKCAKVNVLNRLNGDKKAYVRLSKDHDA 137
Query: 691 WTLPTKLGIL 720
+ K+GIL
Sbjct: 138 LEVANKIGIL 147
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +2
Query: 359 RVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLTSEAQ*RRLK 526
+++KI S+ F+RP+T ++PK P+ KS + +D Y IIK+PLTSE ++++
Sbjct: 26 KMQKITTSIRFKRPRTLRLKKNPKCPKILKSCHTKT-LDKYGIIKYPLTSEKAMKKIE 82
>UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n=3;
Plasmodium|Rep: 60S ribosomal protein L23a, putative -
Plasmodium vivax
Length = 195
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/70 (54%), Positives = 49/70 (70%)
Frame = +1
Query: 511 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 690
MKKIE+ NTLVFI A+K I +VK L+ I+ KVN L R +G KKAYVRL++D+DA
Sbjct: 126 MKKIEEINTLVFICDKRADKKKITKSVKNLFGISCEKVNVLNRLNGDKKAYVRLSKDHDA 185
Query: 691 WTLPTKLGIL 720
+ K+GIL
Sbjct: 186 LEVANKIGIL 195
Score = 56.0 bits (129), Expect = 9e-07
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Frame = +2
Query: 326 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLT 499
Q K E K+ +KI S+ F+RPKT + P++PK P+ KS K+ +D Y I+K+PLT
Sbjct: 63 QVKKAAAEESKKKKKITTSIKFKRPKTLKLPKNPKCPKVIKSCYKKT-LDKYGILKYPLT 121
Query: 500 SEAQ*RRLK 526
SE ++++
Sbjct: 122 SEKAMKKIE 130
>UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=7; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_85, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 150
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = +1
Query: 511 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 690
MKK+ED NT+VF V+ A K IK A K+Y++ V KVN L GKKKAY+RL + DA
Sbjct: 81 MKKMEDENTMVFYVNQKATKPQIKRAFSKIYEVKVRKVNILNTFGGKKKAYIRLGGENDA 140
Query: 691 WTLPTKLGIL 720
L K+GI+
Sbjct: 141 LNLANKIGII 150
>UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27;
Archaea|Rep: 50S ribosomal protein L23P - Methanopyrus
kandleri
Length = 95
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +1
Query: 511 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 690
M+ +E N L FIV ANK IK AV++L+D+ V KVNTLI P G+KKAYV+L +Y A
Sbjct: 26 MRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTLITPTGEKKAYVKLKPEYRA 85
Query: 691 WTLPTKLGIL 720
+ LGIL
Sbjct: 86 EDVAVDLGIL 95
>UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast
precursor; n=1; Spinacia oleracea|Rep: 50S ribosomal
protein L23, chloroplast precursor - Spinacia oleracea
(Spinach)
Length = 198
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
+ +K I D N+L+F V A+K I+ A+ + + V KVNTLIRPDG KKAY+ L ++Y
Sbjct: 123 AAIKNIADENSLLFTVDVRADKKMIREAISNFFGVKVRKVNTLIRPDGTKKAYIMLNKEY 182
Query: 685 DAWTLPTKLGI 717
+A L K+GI
Sbjct: 183 NASELAKKIGI 193
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/72 (44%), Positives = 50/72 (69%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
S +KIE +NT+ F+V ANK + AV K+YD+ V +VNTLI P G+KKA+V L+ ++
Sbjct: 98 SATQKIEGSNTITFMVDMFANKSQVADAVAKMYDVKVKRVNTLITPRGEKKAFVTLSPEF 157
Query: 685 DAWTLPTKLGIL 720
+A + K+G++
Sbjct: 158 EAADVANKIGLI 169
Score = 66.9 bits (156), Expect = 5e-10
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +2
Query: 311 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 490
KA A V KG K RK+R SV FRRP T P+ P YPR+S+ K +MD + I+K
Sbjct: 33 KAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKA 92
Query: 491 PLTSEAQ*RRLK 526
PLT+E+ ++++
Sbjct: 93 PLTTESATQKIE 104
>UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000;
n=1; Mus musculus|Rep: PREDICTED: similar to hCG2001000
- Mus musculus
Length = 137
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Frame = +1
Query: 472 LQHH*IPSHV*STMKKIEDNNTLVFIVHTSANKHHIKAAVKK---LYDINVAKVNTLIRP 642
L+HH IP + ++ EDN T VF V ANK +K AVKK + DI +AKVNTLIRP
Sbjct: 53 LKHHQIPPDNWVSQEETEDN-TSVFTVDVQANKSQMKEAVKKVNDICDIAMAKVNTLIRP 111
Query: 643 DGKKKAYVRLARDYDAWTLPTKLGIL 720
+G+ K YV LA DY+ + K+G +
Sbjct: 112 NGENKMYVWLAPDYEPLDVANKIGFI 137
>UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 169
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/45 (80%), Positives = 37/45 (82%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 639
S MKKIEDN TLVFIV ANKH IK AVKKLYDI+VAKVN LIR
Sbjct: 39 SAMKKIEDN-TLVFIVDVKANKHQIKQAVKKLYDIDVAKVNALIR 82
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 398 PKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAQ*RRLKITT 535
PKT R PK PRKS P+RN++D Y IIKFPLT+E+ ++++ T
Sbjct: 3 PKTLHLRRQPKCPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNT 48
>UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L23A -
Cryptosporidium parvum Iowa II
Length = 156
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/89 (42%), Positives = 54/89 (60%)
Frame = +1
Query: 454 EKSHGCLQHH*IPSHV*STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 633
+KS C P S MK +E NT+VF+V+ ANK IK AV KLYD+ VA VNT+
Sbjct: 68 QKSLDCYDIIKRPITTESAMKMVETLNTIVFLVNERANKTQIKYAVNKLYDVKVANVNTV 127
Query: 634 IRPDGKKKAYVRLARDYDAWTLPTKLGIL 720
KKA+V+L+ D +A + +++GI+
Sbjct: 128 NTFGDGKKAFVKLSPDVEAVDVASRIGII 156
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 308 TKA-LKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 484
TKA K + VK KIR V F RPKT + R+PKY RKS+ + +D Y+II
Sbjct: 18 TKANAKKTAQAVKNSKRSSTTKIRTRVQFYRPKTLKLQRNPKYERKSIKTQKSLDCYDII 77
Query: 485 KFPLTSEA 508
K P+T+E+
Sbjct: 78 KRPITTES 85
>UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L23A -
Guillardia theta (Cryptomonas phi)
Length = 117
Score = 67.3 bits (157), Expect = 4e-10
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
S MKKI+ +NTL F+V NK+ +K + KL+ + K+N+LI +GKKK +V+L ++
Sbjct: 46 SAMKKIQTSNTLTFLVEPMNNKNSLKKIISKLFKVKTIKINSLISMNGKKKIFVKLGPEH 105
Query: 685 DAWTLPTKLGIL 720
DA + K+G +
Sbjct: 106 DALDVANKIGYI 117
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/67 (47%), Positives = 47/67 (70%)
Frame = +1
Query: 517 KIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWT 696
+IE NNT+VFIV A+K I+ A + +++ VA+VNTLI P G KKA++RLA D A
Sbjct: 74 QIEKNNTIVFIVDRRASKPEIRKAFETVFETKVARVNTLITPLGLKKAFIRLAPDVQAMD 133
Query: 697 LPTKLGI 717
+ +K+G+
Sbjct: 134 VASKMGL 140
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Frame = +2
Query: 311 KALKAQRKVVKGEHGKRV--RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 484
+ALKAQ+ ++ HG RV +KIR +VHF RPKT + P YPR + K + D +++
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYPRNPIKKGSWDDPCDLL 62
Query: 485 KFPLTSE 505
++P+ ++
Sbjct: 63 RYPIKTD 69
>UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Archaeoglobus fulgidus
Length = 83
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +1
Query: 526 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWTLPT 705
+ N L IV A K HIK ++KL+++ V +VNTLI P G+KKAY++L DY A + +
Sbjct: 19 EKNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTLITPKGEKKAYIKLKPDYSAEEILS 78
Query: 706 KLGI 717
KLG+
Sbjct: 79 KLGV 82
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +2
Query: 314 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 466
ALK ++ ++G H R RKI V FRRPKT++ R PKY RKS+PKR R+
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVPKYTRKSIPKRPRL 93
>UniRef50_A3H7W7 Cluster: 50S ribosomal protein L23; n=1; Caldivirga
maquilingensis IC-167|Rep: 50S ribosomal protein L23 -
Caldivirga maquilingensis IC-167
Length = 86
Score = 60.1 bits (139), Expect = 5e-08
Identities = 32/66 (48%), Positives = 41/66 (62%)
Frame = +1
Query: 523 EDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWTLP 702
E NTL +V S NK IK V+K Y + V V TLI +G+KKAYVRL+ + +A L
Sbjct: 21 EKENTLTIVVPRSVNKKVIKDYVEKAYKVKVIDVRTLITMEGEKKAYVRLSSENNAIELL 80
Query: 703 TKLGIL 720
T LG+L
Sbjct: 81 TNLGLL 86
>UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
50S ribosomal protein L23P - Methanobacterium
thermoautotrophicum
Length = 86
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/70 (35%), Positives = 45/70 (64%)
Frame = +1
Query: 508 TMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 687
+M I+ NN L F+V + K ++ A ++L+ + V +VNT + P G+K AY++LA+++
Sbjct: 16 SMNLIDQNNELAFVVMRKSTKKDVRRAFEELFAVKVERVNTQVTPRGQKIAYIKLAKEHS 75
Query: 688 AWTLPTKLGI 717
A + KLG+
Sbjct: 76 AEDIAVKLGV 85
>UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG2001000 - Monodelphis domestica
Length = 144
Score = 58.0 bits (134), Expect = 2e-07
Identities = 39/95 (41%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Frame = +1
Query: 436 KEVSA*EKSHGCLQHH*I---PSHV*STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYD 606
K+ + E + L H+ I P S MKKIED++ LVF NK VKKLYD
Sbjct: 29 KDTGSLETASILLDHYAIIKFPLPTESAMKKIEDDDILVFPADIKVNKQ----VVKKLYD 84
Query: 607 INVAKVNTLIRPDGKKKAYVRLARDYDAWTLPTKL 711
I VAKV+TL DG+KK Y+ L + +A + K+
Sbjct: 85 IYVAKVSTLFWLDGEKKTYIYLTPNCNALDVANKM 119
>UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 175
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 633
S MK IEDNNT VFIV ANKH I+ A + LYDI+ A V TL
Sbjct: 77 SAMKNIEDNNTFVFIVDAKANKHQIEQAGETLYDIDTANVTTL 119
Score = 41.1 bits (92), Expect = 0.027
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 419 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEA 508
R PKYPRKS P+RN+ D I+KF LT+++
Sbjct: 48 REPKYPRKSTPRRNKHDHDAIVKFSLTTKS 77
>UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2;
environmental samples|Rep: 50S ribosomal protein L23 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 96
Score = 56.4 bits (130), Expect = 7e-07
Identities = 33/64 (51%), Positives = 38/64 (59%)
Frame = +1
Query: 523 EDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWTLP 702
E+NN + FIV K IKAAV++L D+ V KVNT I G K A VRLA YDA
Sbjct: 32 ENNNRIEFIVRRETTKADIKAAVEELLDVQVVKVNTRITITG-KHASVRLAEGYDAEDAA 90
Query: 703 TKLG 714
KLG
Sbjct: 91 LKLG 94
>UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L23P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 86
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/70 (42%), Positives = 38/70 (54%)
Frame = +1
Query: 508 TMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 687
TM +I D N + F+V SANK IK A + LYD V VNT I P G K A + L
Sbjct: 16 TMNQIYDENKITFVVRRSANKRVIKEAFQDLYDTKVVGVNTHITPRGNKVATIELEEADA 75
Query: 688 AWTLPTKLGI 717
A + +LG+
Sbjct: 76 AEDIAVRLGV 85
>UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L23P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 85
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = +1
Query: 511 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 690
M ++ N L F V A+K + AV++ YD+ V +VNT DG+KKA VRL+ D DA
Sbjct: 16 MNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTMDGEKKAVVRLSEDDDA 75
Query: 691 WTLPTKLGI 717
+ +++G+
Sbjct: 76 QEVASRIGV 84
>UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L23,
putative - Trichomonas vaginalis G3
Length = 140
Score = 53.2 bits (122), Expect = 6e-06
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 517 KIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWT 696
KIE+ NT+ F V A K I AA +LY + KV T+I KKAY+RL + +A
Sbjct: 73 KIENENTMTFWVDIKATKTEIAAAFNRLYKVKPVKVCTVITSKFVKKAYIRLPANVEAMN 132
Query: 697 LPTKLG 714
+ T++G
Sbjct: 133 IATEIG 138
>UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Uncultured methanogenic archaeon RC-I
Length = 82
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/66 (39%), Positives = 41/66 (62%)
Frame = +1
Query: 520 IEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWTL 699
++ NNTL F+V A K IK A++++Y++ V KV T I G KKA V L+ + A +
Sbjct: 16 LDKNNTLQFMVDMRATKPQIKKAIEEMYNVKVVKVTTQITARGGKKAVVTLSPENRAEEI 75
Query: 700 PTKLGI 717
++LG+
Sbjct: 76 ASRLGV 81
>UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L23P -
Picrophilus torridus
Length = 82
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +1
Query: 508 TMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 687
T +E N + F+V+ A K IK V+ +++ VAKVN +I +G KKA V LA+D+
Sbjct: 13 TTLMMEKENKITFLVNRKATKEAIKNEVEARFNVKVAKVNMMIAKNG-KKAIVTLAKDFS 71
Query: 688 AWTLPTKLGI 717
A + ++GI
Sbjct: 72 AEEVGGRMGI 81
>UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1;
Methanospirillum hungatei JF-1|Rep: 50S ribosomal
protein L23P - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 82
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +1
Query: 520 IEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWTL 699
+E + L FIV A+K IK A++K++D V +V TL+ G+KKA V + A +
Sbjct: 16 VERDGQLQFIVDRKASKGQIKVAIEKMFDQPVTRVRTLMNNRGEKKAMVSFSNPKAAEEI 75
Query: 700 PTKLGIL 720
++LGI+
Sbjct: 76 LSRLGIM 82
>UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Rhodopseudomonas palustris
Length = 99
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +1
Query: 526 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 663
++N +VF V A K IK AV+KL+D+ V VNTL+R GK KA+
Sbjct: 26 EHNKVVFKVQGGATKPQIKEAVEKLFDVKVKSVNTLVR-KGKTKAF 70
>UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L25/L23 - Candidatus Nitrosopumilus maritimus SCM1
Length = 88
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/71 (39%), Positives = 38/71 (53%)
Frame = +1
Query: 508 TMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 687
T +E+ + + FIV SA+K I AV LY+ V VNT R KKA+V+
Sbjct: 19 TFAMVENESKICFIVERSASKPEISEAVNTLYNEKVLNVNT-ARTIYGKKAFVQFENTEK 77
Query: 688 AWTLPTKLGIL 720
A L TK+G+L
Sbjct: 78 ARDLATKIGML 88
>UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L23P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 82
Score = 44.8 bits (101), Expect = 0.002
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = +1
Query: 526 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWTLPT 705
D N L FIV T +NK I V+KLY V V T+ G KKA + A + T
Sbjct: 18 DENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTMTTMKGTKKAVLAFEEPEAAHEIAT 77
Query: 706 KLGIL 720
++G++
Sbjct: 78 RIGLM 82
>UniRef50_A7I5P1 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein L25/L23
- Methanoregula boonei (strain 6A8)
Length = 83
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1
Query: 511 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 690
M +E+ + L F+V A K IK ++K +D V V+TL+ G+KKA V A
Sbjct: 14 MVLLENESKLQFLVDRKATKQDIKREIEKAFDQKVKSVHTLMSMHGEKKAVVSFENAKAA 73
Query: 691 WTLPTKLGIL 720
+ ++LGI+
Sbjct: 74 EEILSRLGIM 83
>UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 100
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +1
Query: 523 EDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 663
E NNT+VF V ANK IKAAV+KL+++ V V T + GK K +
Sbjct: 25 EVNNTVVFKVLKDANKEEIKAAVEKLFEVEVNSVRT-VNVKGKTKRH 70
>UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 107
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +1
Query: 520 IEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 687
+ + N +VF V SA K IKAAV+KL+++ V VNTL++ K+ R R D
Sbjct: 31 LSERNQVVFKVAPSATKPQIKAAVEKLFNVKVTGVNTLVQKGKVKRVKGRPGRRSD 86
>UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Shigella flexneri
Length = 100
Score = 42.3 bits (95), Expect = 0.012
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +1
Query: 520 IEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 687
+E +NT+V V A K IKAAV+KL+++ V VNTL+ K+ R+ R D
Sbjct: 24 MEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSD 79
>UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8;
Francisella tularensis|Rep: 50S ribosomal protein L23 -
Francisella tularensis subsp. tularensis (strain FSC
198)
Length = 99
Score = 41.9 bits (94), Expect = 0.015
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 529 NNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAW 693
N+T+VF V ANK +K AV+KL+++ V VN ++ GK + + R+ AW
Sbjct: 27 NSTIVFEVARFANKQDVKNAVEKLFEVKVESVN-ILNVKGKARRFGRVEGGTKAW 80
>UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10;
Bacteria|Rep: 50S ribosomal protein L23 - Aquifex
aeolicus
Length = 103
Score = 41.9 bits (94), Expect = 0.015
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1
Query: 520 IEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 663
+ED N F V A+K IK AV+KL+++ V KVNT+I KK+ +
Sbjct: 23 MEDYNKYTFEVALDASKPEIKYAVEKLFNVKVKKVNTMIVKPKKKRVW 70
>UniRef50_A3CSZ9 Cluster: 50S ribosomal protein L23; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L23 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 82
Score = 41.1 bits (92), Expect = 0.027
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +1
Query: 520 IEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWTL 699
+E + L FIV A K IK ++ ++ VA V T++ G+KKA V A A +
Sbjct: 16 LEGESKLQFIVQRDATKQDIKRELESAFEQEVANVRTMMTMKGEKKAIVTFADAKAAEEI 75
Query: 700 PTKLGIL 720
++LGI+
Sbjct: 76 LSRLGIM 82
>UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L23 - Lentisphaera araneosa HTCC2155
Length = 93
Score = 39.9 bits (89), Expect = 0.062
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 520 IEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAW 693
+ED N F V +SANK I AV+K++++ V VNT+ KK+ +A W
Sbjct: 20 MEDQNKYTFKVASSANKIEIANAVQKIFNVKVQSVNTMNYTGKKKRQRTAMAGKKANW 77
>UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14;
Clostridia|Rep: 50S ribosomal protein L23 - Clostridium
perfringens
Length = 97
Score = 39.9 bits (89), Expect = 0.062
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +1
Query: 532 NTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
N FIVH +ANK IK AV++++++ VA V T+ R +GK K
Sbjct: 25 NKYTFIVHMAANKVQIKRAVEEVFNVKVADVKTM-RFEGKTK 65
>UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36;
Bacteria|Rep: 50S ribosomal protein L23 -
Propionibacterium acnes
Length = 102
Score = 39.5 bits (88), Expect = 0.082
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1
Query: 526 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 639
D NT F+V +ANK IK A+++++ + V VNT+ R
Sbjct: 27 DQNTYTFVVKPTANKTEIKIAIEQIFGVKVTSVNTMNR 64
>UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 120
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 514 KKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 633
K E+ N ++F S K IK +K LYD+NV KVNT+
Sbjct: 33 KTFENTNKIMFKTDCSVGKTDIKTYMKALYDVNVDKVNTI 72
>UniRef50_Q74N77 Cluster: 50S ribosomal protein L23P; n=3; cellular
organisms|Rep: 50S ribosomal protein L23P - Nanoarchaeum
equitans
Length = 78
Score = 39.1 bits (87), Expect = 0.11
Identities = 25/68 (36%), Positives = 34/68 (50%)
Frame = +1
Query: 511 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDA 690
++ +E NT+ +V K IK +K V KVNTLI G KKAYVR + A
Sbjct: 10 LRLLEQYNTITILVPREYTKSKIKEFFEKK-GYKVKKVNTLITKKGLKKAYVRFKEEGVA 68
Query: 691 WTLPTKLG 714
+ +LG
Sbjct: 69 RKVAEELG 76
>UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11;
Bacteria|Rep: 50S ribosomal protein L23 - Geobacter
sulfurreducens
Length = 94
Score = 39.1 bits (87), Expect = 0.11
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 505 STMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVR 669
+T++K + N + F V ANK IK AV+KL+ + VA+VNT + GK K + R
Sbjct: 16 TTIEK-DSKNVVSFEVDRDANKIEIKEAVEKLFKVEVAEVNT-VNVAGKVKRFGR 68
>UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 255
Score = 38.7 bits (86), Expect = 0.14
Identities = 23/45 (51%), Positives = 26/45 (57%)
Frame = -3
Query: 504 SDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 370
S V NLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 168 SVVSRNLMIARWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 212
>UniRef50_Q7VKD4 Cluster: 50S ribosomal protein L23; n=27;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Haemophilus ducreyi
Length = 101
Score = 38.7 bits (86), Expect = 0.14
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +1
Query: 514 KKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 687
K E NT+VF V ANK + AV++L+++ V V T++ K+ R+ R D
Sbjct: 22 KNAEKGNTIVFKVALDANKVEVANAVQELFEVKVDSVRTVVVKGKTKRHGARMGRRSD 79
>UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Thalassiosira pseudonana|Rep: Chloroplast 50S
ribosomal protein L23 - Thalassiosira pseudonana (Marine
diatom)
Length = 98
Score = 38.7 bits (86), Expect = 0.14
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 529 NNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
NN FIV ++K IKAA++ L+++ V K+NT P KK+
Sbjct: 25 NNQYSFIVSPKSDKPTIKAAIEYLFNVKVVKINTAHLPKKKKR 67
>UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L23 - Gracilaria tenuistipitata var. liui (Red alga)
Length = 103
Score = 38.7 bits (86), Expect = 0.14
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 508 TMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
T + IE+N F V A K IK A+++L+D+ V ++NTLI KK+
Sbjct: 25 TTQMIEENK-YSFAVEVKAKKPKIKEAIEQLFDVKVQQINTLIVKPQKKR 73
>UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Flavobacterium hibernum
Length = 96
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 514 KKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDGKKK 657
K+ E N F+V ANK IK AV+ Y + + VNT+ +RPD K
Sbjct: 15 KESEVLNRFGFVVDKKANKVQIKKAVEAAYGVTIVSVNTMNVRPDRTTK 63
>UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candidatus
Pelagibacter ubique|Rep: 50S ribosomal protein L23 -
Candidatus Pelagibacter ubique HTCC1002
Length = 97
Score = 37.1 bits (82), Expect = 0.44
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +1
Query: 520 IEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 660
+ + N +VF V +ANK ++K ++K++ +NV K+N + + + K A
Sbjct: 22 LSEQNKIVFKVPRAANKTNLKKNIEKIFKVNVTKINIINKQNRTKVA 68
>UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L23 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 98
Score = 37.1 bits (82), Expect = 0.44
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +1
Query: 541 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 663
+F+V +ANK++I A++ ++++NV KVN +I GK K +
Sbjct: 28 IFLVQRNANKYNISKAIEGIFNVNVIKVN-IINMIGKTKRF 67
>UniRef50_A0RVX6 Cluster: 50S ribosomal protein L23; n=1;
Cenarchaeum symbiosum|Rep: 50S ribosomal protein L23 -
Cenarchaeum symbiosum
Length = 80
Score = 37.1 bits (82), Expect = 0.44
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 508 TMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYD 687
T +E + + FIV +A+K I A+ +Y VNT R KKA+V+
Sbjct: 11 TFAMVERESKVCFIVRNTASKPEIAEAISIMYGEKATGVNT-ARTIYGKKAFVQFGNVEK 69
Query: 688 AWTLPTKLGIL 720
A L TK+G+L
Sbjct: 70 ARDLATKIGML 80
>UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7;
Bacteria|Rep: 50S ribosomal protein L23 - Thermotoga
maritima
Length = 100
Score = 37.1 bits (82), Expect = 0.44
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 520 IEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDGKKK 657
+ + VF V+ ANK+ +K AV+KL+++ V KVN L ++P K++
Sbjct: 24 LREQRKYVFEVNPLANKNLVKEAVEKLFNVKVEKVNILNMKPKPKRR 70
>UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16;
Actinomycetales|Rep: 50S ribosomal protein L23 -
Streptomyces coelicolor
Length = 139
Score = 36.7 bits (81), Expect = 0.58
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 526 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
D N F+V +NK IK AV+ ++ + V VNT+ R GK+K
Sbjct: 64 DENKYTFVVAPGSNKTQIKEAVQAVFSVKVTGVNTINR-QGKRK 106
>UniRef50_Q7MTL5 Cluster: 50S ribosomal protein L23; n=8;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 97
Score = 36.7 bits (81), Expect = 0.58
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +1
Query: 544 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
F V +ANK IK AV+ +Y++ V VNT+ R DGK+K
Sbjct: 26 FRVSPNANKIEIKKAVEAMYNVKVEDVNTM-RYDGKRK 62
>UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Stigeoclonium helveticum|Rep: Chloroplast 50S
ribosomal protein L23 - Stigeoclonium helveticum (Green
alga)
Length = 118
Score = 36.7 bits (81), Expect = 0.58
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 529 NNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDY 684
NN +F V K IK +++ +++NV VNT RP KK+ Y++ + Y
Sbjct: 21 NNQYMFNVDLRLTKPQIKKLIEQYFEVNVISVNT-HRPPRKKRLYIQTSPGY 71
>UniRef50_Q11XR3 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 401
Score = 36.3 bits (80), Expect = 0.77
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -3
Query: 705 CWQRPSVI-ISSESNVRFLLTI-RPDECVDFSNIYIIEFLDCSLDMVLVCTCVNNKDQ 538
C SVI +S+ SN+ L P +D SNI +E+L+CS L C+N DQ
Sbjct: 271 CCNNLSVIDVSANSNITLLFCYSNPITTLDVSNITNLEYLNCSSCPNLSTVCINTTDQ 328
>UniRef50_A6BIQ4 Cluster: 50S ribosomal protein L23; n=23;
Firmicutes|Rep: 50S ribosomal protein L23 - Dorea
longicatena DSM 13814
Length = 101
Score = 36.3 bits (80), Expect = 0.77
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 544 FIVHTSANKHHIKAAVKKLY-DINVAKVNTLIRPDGKKK 657
F+VH A K IK AV+K++ V KVNT+ DGKKK
Sbjct: 30 FLVHPEATKSQIKEAVEKMFTGTKVEKVNTM-NNDGKKK 67
>UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3;
Bacteria|Rep: 50S ribosomal protein L23 - uncultured
bacterium 562
Length = 98
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +1
Query: 523 EDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
E +VF V +ANK IK AV++L+ + V KV T I GK+K
Sbjct: 24 ESLKQIVFKVDLTANKREIKKAVEELFKVEVTKVTTSI-VKGKRK 67
>UniRef50_Q6YR18 Cluster: 50S ribosomal protein L23; n=3; Candidatus
Phytoplasma|Rep: 50S ribosomal protein L23 - Onion
yellows phytoplasma
Length = 96
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 508 TMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDGKKK 657
T K IE N F V +ANK IK A++ ++ + V VNT + P K+K
Sbjct: 17 TNKLIERQNKYTFKVAKTANKVEIKKALESIFQVKVLSVNTRNVLPQFKRK 67
>UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L23 - candidate division TM7 genomosp. GTL1
Length = 102
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 532 NTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLI 636
NT VF+V NK I AV Y + VAKV TL+
Sbjct: 22 NTYVFVVPIKVNKQQIADAVATQYGVKVAKVTTLV 56
>UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycoplasma
gallisepticum|Rep: 50S ribosomal protein L23 -
Mycoplasma gallisepticum
Length = 108
Score = 35.5 bits (78), Expect = 1.3
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 544 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRLARDYDAWTLPTKLGIL 720
F+V+ ANK++IK A K +Y + VNT I KK A VR ++ K+ I+
Sbjct: 29 FLVNAKANKNYIKQAFKAIYGVTPIAVNTKI----KKPARVRTGTQNPGYSRLEKIAII 83
>UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Bacteroides thetaiotaomicron
Length = 96
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 511 MKKIEDN-NTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKA 660
M I D N F+V ANK IK V+ LY++ V VNT ++ GK K+
Sbjct: 13 MTAITDKLNRFGFVVRPDANKLEIKKEVEALYNVTVVDVNT-VKYAGKNKS 62
>UniRef50_Q4N6P3 Cluster: Ribosomal protein L223, putative; n=2;
Theileria|Rep: Ribosomal protein L223, putative -
Theileria parva
Length = 252
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 526 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR-PDGKKKAYVRLARDY 684
+ N L V + K I+ ++KLYD V KVNTLI+ P K+ RL + Y
Sbjct: 34 ERNRLALRVPINLTKFEIREYLRKLYDAKVIKVNTLIKIPRIKRDFSSRLPKYY 87
>UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55;
Alphaproteobacteria|Rep: 50S ribosomal protein L23 -
Silicibacter pomeroyi
Length = 98
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1
Query: 526 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAY 663
+N +VF V +NK IK AV+ L+ + V VNT I GK K +
Sbjct: 25 ENGAVVFEVSIDSNKPQIKEAVESLFGVKVKAVNTTI-TKGKVKRF 69
>UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Emiliania huxleyi|Rep: Chloroplast 50S ribosomal
protein L23 - Emiliania huxleyi
Length = 99
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +1
Query: 517 KIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
++ + N F V A+K IK+AV+ L+D+ V VNT +P K++
Sbjct: 23 RLIEQNQYSFAVDRKADKISIKSAVEALFDVQVVAVNTANQPLKKRR 69
>UniRef50_A7TL58 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1036
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/83 (27%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Frame = -3
Query: 690 SVIISSESNVRFLLTIRPDECVDFSNIYIIEFLDCSLDMVLVCTCVNN-KDQGVV--IFN 520
S++ISSE+N+R+L + S +I+ + C ++ L+C +NN KDQ ++ + +
Sbjct: 391 SLLISSETNIRYLALDSLVKLCAISEKTVIDSV-CKKNLNLICRLLNNEKDQSILRKLVD 449
Query: 519 LLHCASDVRGNLMML*ASMRFLL 451
LL+ ++V +++ ++F+L
Sbjct: 450 LLYSFTNVDNVKIIVNHLLKFIL 472
>UniRef50_Q1VLV7 Cluster: 50S ribosomal protein L23; n=2;
Flavobacteriaceae|Rep: 50S ribosomal protein L23 -
Psychroflexus torquis ATCC 700755
Length = 106
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 523 EDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 633
E N FIV +ANK IK+AV+ ++++V+KV T+
Sbjct: 20 ERQNKYAFIVSHNANKIQIKSAVENKFNVSVSKVATM 56
>UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1;
Psychroflexus torquis ATCC 700755|Rep: 50S ribosomal
protein L23 - Psychroflexus torquis ATCC 700755
Length = 63
Score = 34.3 bits (75), Expect = 3.1
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +1
Query: 508 TMKKIEDNNT---LVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGK 651
T K +E +T L FIV SA+K I AV+ ++D+ V KVN GK
Sbjct: 13 TEKSMEARSTQQRLEFIVRRSASKDDIAKAVETIFDVEVEKVNVRNSKHGK 63
>UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2;
Mycoplasma|Rep: 50S ribosomal protein L23 - Mycoplasma
pneumoniae
Length = 237
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 541 VFIVHTSANKHHIKAAVKKLYDINVAKVNTLIR 639
VF+V+ A+K +K A + +Y I KVNTLIR
Sbjct: 28 VFVVNPKASKTRVKLAFELVYGIKPLKVNTLIR 60
>UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7;
Bacilli|Rep: 50S ribosomal protein L23 - Lactococcus
lactis subsp. cremoris (strain SK11)
Length = 97
Score = 34.3 bits (75), Expect = 3.1
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 526 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL-IRPDGKK 654
D F V + A+K IK AV+ ++D+ VA VNT+ ++P K+
Sbjct: 21 DQKKYTFEVDSRAHKLLIKQAVEAVFDVKVASVNTISVKPKSKR 64
>UniRef50_Q241C6 Cluster: Phage head-tail adaptor, putative family
protein; n=1; Tetrahymena thermophila SB210|Rep: Phage
head-tail adaptor, putative family protein - Tetrahymena
thermophila SB210
Length = 1234
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 312 LVTGFTT-FFCPLIPVFLGFVQSSIWKLLAWVWQFWL 205
L T FTT F+CP++P+ + IW L+ ++ Q+W+
Sbjct: 791 LTTMFTTAFYCPIVPITI------IWSLICFILQYWI 821
>UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 122
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 320 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 487
K +K+ + ++GK++R+ +N RRPK + R PK +K P++ + D N IK
Sbjct: 36 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPEKRQKD--NTIK 90
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 320 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 460
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 9 KNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 55
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 320 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 460
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 18 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 64
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 320 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 460
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 27 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 73
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 329 RKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 460
+K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 3 KKIRRQKNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 46
>UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14;
Bacteria|Rep: 50S ribosomal protein L23 - Thermus
thermophilus
Length = 96
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +1
Query: 544 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
F VH A K IK AV+ + + V KVNTL GKKK
Sbjct: 28 FWVHPKATKTEIKNAVETAFKVKVVKVNTL-HVRGKKK 64
>UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces
cerevisiae YNL249c MPA43; n=1; Kluyveromyces lactis|Rep:
Similar to sp|P53583 Saccharomyces cerevisiae YNL249c
MPA43 - Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 516
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -3
Query: 621 FSNIYIIEFLDCSLDMVLVCTCV--NNKDQGVVIFNLLH 511
F+ +YI E+ CSL + C+ V KD+ ++ FNL+H
Sbjct: 60 FNTLYIQEYNICSLGVGATCSMVVGKQKDENLIPFNLIH 98
>UniRef50_Q7NPG8 Cluster: 50S ribosomal protein L23; n=7; cellular
organisms|Rep: 50S ribosomal protein L23 - Gloeobacter
violaceus
Length = 100
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 517 KIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
++ + N +F V ANK I A+++L+ + V KVNT P +++
Sbjct: 24 RLLEENKYLFEVTPGANKIQIAQAIEELFSVKVTKVNTFNPPARQRR 70
>UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1;
Mariprofundus ferrooxydans PV-1|Rep: 50S ribosomal
protein L23 - Mariprofundus ferrooxydans PV-1
Length = 99
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 532 NTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
N F V A+K +KAA++ ++++NV KV + P K+
Sbjct: 28 NQYTFRVAREASKAQVKAAIEAIFEVNVDKVQVINMPSKPKR 69
>UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1;
Bacteroides capillosus ATCC 29799|Rep: 50S ribosomal
protein L23 - Bacteroides capillosus ATCC 29799
Length = 99
Score = 32.7 bits (71), Expect = 9.5
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 544 FIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKK 657
F V SANK I AV++++ + V KVNTL GK+K
Sbjct: 29 FEVAKSANKIEIAKAVEEIFGVKVVKVNTL-NMQGKEK 65
>UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellular
organisms|Rep: 50S ribosomal protein L23 -
Prochlorococcus marinus
Length = 102
Score = 32.7 bits (71), Expect = 9.5
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 526 DNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRP 642
D N F V A K IKAAV+KL+D+ V ++T+ P
Sbjct: 27 DINQYTFEVDHRAAKPDIKAAVEKLFDVKVIGISTMNPP 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,220,690
Number of Sequences: 1657284
Number of extensions: 10114929
Number of successful extensions: 29284
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 28399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29244
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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