Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0396
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061087-1|AAL28635.1|  296|Drosophila melanogaster LD07651p pro...    42   6e-04
AE014297-1356|AAF54680.1|  296|Drosophila melanogaster CG14716-P...    42   6e-04

>AY061087-1|AAL28635.1|  296|Drosophila melanogaster LD07651p
           protein.
          Length = 296

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 29/86 (33%), Positives = 42/86 (48%)
 Frame = +3

Query: 69  FTTRMRKATRKIHSVSXALVNAEICDIR*ETIPVWGGGLFVFYHIFGISLKMXKERLNMP 248
           FT  +RKAT+ +H+++  LVNA+I  +      VW  GL  FY ++        ERL +P
Sbjct: 27  FTKELRKATKDVHNLTDVLVNAKIA-LALSDDEVWYDGLLAFYELYKFFETHLPERL-LP 84

Query: 249 RINKLFVA*NSFTERRAFEQDLANTY 326
           +          F    AFE+D A  Y
Sbjct: 85  K---------EFHRTAAFERDFAYFY 101


>AE014297-1356|AAF54680.1|  296|Drosophila melanogaster CG14716-PA
           protein.
          Length = 296

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 29/86 (33%), Positives = 42/86 (48%)
 Frame = +3

Query: 69  FTTRMRKATRKIHSVSXALVNAEICDIR*ETIPVWGGGLFVFYHIFGISLKMXKERLNMP 248
           FT  +RKAT+ +H+++  LVNA+I  +      VW  GL  FY ++        ERL +P
Sbjct: 27  FTKELRKATKDVHNLTDVLVNAKIA-LALSDDEVWYDGLLAFYELYKFFETHLPERL-LP 84

Query: 249 RINKLFVA*NSFTERRAFEQDLANTY 326
           +          F    AFE+D A  Y
Sbjct: 85  K---------EFHRTAAFERDFAYFY 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,858,057
Number of Sequences: 53049
Number of extensions: 561943
Number of successful extensions: 898
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)