Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0396
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83236-1|CAB05777.1|  445|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AC006723-5|AAK68424.1|  575|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z83236-1|CAB05777.1|  445|Caenorhabditis elegans Hypothetical
           protein K10H10.1 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -1

Query: 252 FWAYLISLLXSSRICQKYGRRQTGLHPILVWSL 154
           FW Y ++ + + RI  KYG  +   +  L W++
Sbjct: 68  FWGYALTQVFAGRIADKYGAEKILPYSSLAWTM 100


>AC006723-5|AAK68424.1|  575|Caenorhabditis elegans Hypothetical
           protein Y19D10B.5 protein.
          Length = 575

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 178 PPHTGMVSQRISQISALTKAXLTECIFRVAFLMRVVNRSCSDIF 47
           PPH+ MVS R S+I+      L  C+  +  +  V    C+D +
Sbjct: 3   PPHSTMVSPRASKINGW--KTLLNCLQTIKCIQNVSLDPCNDFY 44


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,735,293
Number of Sequences: 27780
Number of extensions: 291137
Number of successful extensions: 524
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)