Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0395
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.0  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   7.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.3  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 85  VCYHFQLKVNFFFLVKFINKMYF 17
           +C+    K+++  L  F+N  YF
Sbjct: 277 LCFLLDEKLSYIILTSFLNNFYF 299


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 430 IKNTNHIFIHIIPQGXPYILIPFIVIM 510
           IKNT      + P+   Y ++ F+V+M
Sbjct: 79  IKNTEPGMFRVAPELLGYSVVVFVVVM 105


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +1

Query: 421 YG*IKNTNHIFIHIIPQGXPYILIPFIVIMKPSEILFDRNF 543
           YG   N  HI I  I       L PF V+  P+  L D  F
Sbjct: 359 YGDFHNMGHILIGYIHDPDHRFLEPFGVMADPAVDLRDPLF 399


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 425 PYNINLSHRGIDKDKDIVKCLVLVKIYG 342
           P  + + H G    ++  K  VLV IYG
Sbjct: 21  PQRLRIRHHGDKPPQERPKVPVLVWIYG 48


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +1

Query: 445 HIFIHIIP 468
           HIF+HI+P
Sbjct: 60  HIFMHIVP 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,227
Number of Sequences: 336
Number of extensions: 1807
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)