Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0393
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.37 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   1.5  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   2.6  
CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    24   4.5  
AJ419879-1|CAD12039.1|   34|Anopheles gambiae hypothetical prote...    24   4.5  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    24   4.5  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   6.0  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   7.9  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 27.5 bits (58), Expect = 0.37
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +1

Query: 406  LATDSPL--GTPAEIDTLSCSQRKAS*VSLNWLTPKIGARPVVISVRKT 546
            ++T +P+  G PA + T      K   VS  + TP+IG  P V   +KT
Sbjct: 1067 VSTTNPVIGGAPALLPTTRTLLLKRPLVSARYGTPRIGPAPAVEPAKKT 1115


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -2

Query: 565 WHRYNVRF-SERILLQVLRRSSASANLMRPMKLFSGCMRECLSPPVFLTASLSPALRN 395
           W  YN +  S      +  + + SAN      LF+    +C SP +  T ++  AL N
Sbjct: 471 WRFYNSKTKSTHTPKSITYKGATSANTNEMCNLFADRFADCFSPAMNDTDTIDAALVN 528


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +1

Query: 40  HGNTSHLNTEVHEHYKGNGLIRV-SHGAPHDVWYPSQWTISSPPPRPTLTHSGHVRVHH 213
           +G   ++N  +   Y   G   + SH +PH V      T++      +LTHS H   HH
Sbjct: 450 NGYGDYMNNCLQSGYFSGGFSSLHSHHSPHHVSPGMGSTVNGA----SLTHSHHAHPHH 504


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia
          homeotic protein protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 52 SHLNTEVHEHYKGNGL 99
          S++N+++H HY G G+
Sbjct: 18 SYMNSDMHGHYPGTGV 33


>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 433 VFLTASLSPALRNRADAE 380
           VF  A L PA+R R DAE
Sbjct: 56  VFKLARLIPAVRRRVDAE 73


>AJ419879-1|CAD12039.1|   34|Anopheles gambiae hypothetical protein
           protein.
          Length = 34

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 356 SRQTKFLFLCISS 394
           SR T FLF+C+SS
Sbjct: 5   SRVTPFLFICVSS 17


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 305 WKRHPSSMCTIIPLYGSSRQ 364
           +K++P     + PL+GSSRQ
Sbjct: 29  FKKYPIPCLPVEPLFGSSRQ 48


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 497 SQFNETYEAFLWLHERVSISAG 432
           ++F  TY+A LWL E   +  G
Sbjct: 421 TRFEGTYKAVLWLREHKHLFQG 442


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 273 KISRRDFQVVNLSVDEVDSGVVHA 202
           K   +DF+ + L ++E+  G+V A
Sbjct: 811 KKHEQDFETLKLEIEELQKGIVTA 834


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,007
Number of Sequences: 2352
Number of extensions: 12993
Number of successful extensions: 41
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)