Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0392
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   0.89 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.2  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.2  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   1.2  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   4.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   4.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.8  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 191 ISSFKRNIYTFINLQQLTYLLIKLRAITLFIHVRTQLPFTIHIKLI*INTF 39
           I S K N Y  +N     YLL+K     + +  +T LP T+  KL+ I  F
Sbjct: 21  ILSNKNNTYLVLN----KYLLVKHSKPKMPLLPKTPLPLTLLYKLLGIIQF 67


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 288 LTTDRLNILLYRARFLTKLLLKYTYRNITSKFNFI 184
           LT  ++ I     R   K   K+T +++TS F+F+
Sbjct: 222 LTERQIKIWFQNRRMKAKKDTKFTEQSVTSTFDFL 256


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 288 LTTDRLNILLYRARFLTKLLLKYTYRNITSKFNFI 184
           LT  ++ I     R   K   K+T +++TS F+F+
Sbjct: 222 LTERQIKIWFQNRRMKAKKDTKFTEQSVTSTFDFL 256


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 288 LTTDRLNILLYRARFLTKLLLKYTYRNITSKFNFI 184
           LT  ++ I     R   K   K+T +++TS F+F+
Sbjct: 222 LTERQIKIWFQNRRMKAKKDTKFTEQSVTSTFDFL 256


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 502 FKQNTSGSKYITFL*NFSXSKFIIIKSYM 416
           + ++T   +Y  F+  F+ S F+I +SY+
Sbjct: 172 YLRSTLSDRYKVFVDLFNLSTFLIPRSYI 200


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 502 FKQNTSGSKYITFL*NFSXSKFIIIKSYM 416
           + ++T   +Y  F+  F+ S F+I +SY+
Sbjct: 332 YLRSTLSDRYKVFVDLFNLSTFLIPRSYI 360


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 502 FKQNTSGSKYITFL*NFSXSKFIIIKSYM 416
           + ++T   +Y  F+  F+ S F+I +SY+
Sbjct: 332 YLRSTLSDRYKVFVDLFNLSTFLIPRSYI 360


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +2

Query: 215 YVYFNNNFVRNLALYNNIFNRSVVKLFFH 301
           +VY++      + L+N++F    + + FH
Sbjct: 353 FVYYHRILGETVDLFNSLFGYQTLLITFH 381


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,847
Number of Sequences: 336
Number of extensions: 2811
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)