Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0392
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding pr...    23   7.8  
AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative odorant-b...    23   7.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   7.8  

>AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding
           protein AgamOBP27 protein.
          Length = 119

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = -2

Query: 294 NNLTTDRLNILLYRARFLTKLLLKYTYRNITSKFNFIFQTQYLHIYKLTTANVF 133
           +N T +R  I+ +  RF++K + +  Y   T      +      +Y+    NV+
Sbjct: 59  DNFTFNRDTIMRFTNRFVSKEISEKVYNICTDNVTPTYCVTAFDVYQCIYENVY 112


>AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative
           odorant-binding protein OBPjj12 protein.
          Length = 119

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = -2

Query: 294 NNLTTDRLNILLYRARFLTKLLLKYTYRNITSKFNFIFQTQYLHIYKLTTANVF 133
           +N T +R  I+ +  RF++K + +  Y   T      +      +Y+    NV+
Sbjct: 59  DNFTFNRDTIMRFTNRFVSKEISEKVYNICTDNVTPTYCVTAFDVYQCIYENVY 112


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/31 (32%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = -2

Query: 231  LLKYT--YRNITSKFNFIFQTQYLHIYKLTT 145
            L++Y+   R++T     I ++++ H++KLTT
Sbjct: 950  LIRYSTALRDLTQMMRDIRKSRFSHLHKLTT 980


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,282
Number of Sequences: 2352
Number of extensions: 9716
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)