Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0391
         (605 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.1  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.1  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -1

Query: 362 TNKSIVNYWKNIFTQNAIFLCY*FVFFLCNIL 267
           T+  +   W  +   +A ++CY F  F C ++
Sbjct: 125 TSSYMTGIWVWLINISATYICYAFGKFSCKVM 156


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -1

Query: 362 TNKSIVNYWKNIFTQNAIFLCY*FVFFLCNIL 267
           T+  +   W  +   +A ++CY F  F C ++
Sbjct: 358 TSSYMTGIWVWLINISATYICYAFGKFSCKVM 389


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -1

Query: 362 TNKSIVNYWKNIFTQNAIFLCY*FVFFLCNIL 267
           T+  +   W  +   +A ++CY F  F C ++
Sbjct: 358 TSSYMTGIWVWLINISATYICYAFGKFSCKVM 389


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +3

Query: 132 VFSNS*KQKCVCGRVKAHFFISFQLVCYLSIHKTHQNFVELS 257
           +F+   K    C  +KA FF+S +   Y ++ + H+   E++
Sbjct: 214 IFNGKRKNPNGCD-IKATFFVSHKYTNYSAVQEMHRKGHEIA 254



 Score = 21.4 bits (43), Expect = 6.1
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 416 NMSSPFD-VVIIDFHCICMYLITTFP*SVPDAR*N*TISITNENDIYENNFFL 571
           N + P D  V +   C C    TT P  +P       I+IT ++ I  NN  L
Sbjct: 158 NRAPPCDPAVCVLPDCFCSEDGTTIPGDLPSKDVPQMITITFDDAINNNNIEL 210


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +3

Query: 168 GRVK-AHFFISFQLVCYLSIH 227
           GR+     FISF  +CYL  H
Sbjct: 212 GRISNRRVFISFSKICYLHQH 232



 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = -2

Query: 568  EKIVLIYIIFICYADGLILSSIRN*LRECGYQIHTYTVKIYY 443
            EKIV +++++I +   +  + +      C   I     KIY+
Sbjct: 988  EKIVWLHLVYISFLGIICAADVFYICHVCYATIQEVRAKIYF 1029


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = +3

Query: 168 GRVK-AHFFISFQLVCYLSIH 227
           GR+     FISF  +CYL  H
Sbjct: 230 GRISNRRVFISFSKICYLHQH 250


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 330 IFPIIHYRF-VCTLFVLARYTL 392
           ++  IH  F VCT F LA Y+L
Sbjct: 16  VYTAIHPLFYVCTFFGLAPYSL 37


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 329 IFTQNAIFLCY*FVFFLCNILKVSR 255
           I+T N  +LC+ F + L  +   SR
Sbjct: 316 IYTFNLFYLCFCFYWLLVMVAMFSR 340


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = +2

Query: 191 HIFSVSLLLIYTQDTPKLCGVIVKLSKCCKEKKQIN 298
           HIF+V   LIY  D  K  G    ++     K  IN
Sbjct: 163 HIFTVCRTLIYIDDNVKGLGKQYNIASSKTLKLSIN 198


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = +3

Query: 330 IFPIIHYRF-VCTLFVLARYTL 392
           ++  IH  F VCT F LA Y+L
Sbjct: 16  VYTAIHPLFYVCTFFGLAPYSL 37


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 329 IFTQNAIFLCY*FVFFLCNILKVSR 255
           I+T N  +LC+ F + L  +   SR
Sbjct: 272 IYTFNLFYLCFCFYWLLVMVAMFSR 296


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +3

Query: 315 VLCKYIFPIIHYRFVCTLFVLARYTLNITGCY 410
           ++C Y F  +H  F C   +   + L +   Y
Sbjct: 255 LVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIY 286


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = -2

Query: 568 EKIVLIYIIFICYADGLILSSIRN*LRECGYQIHTYTVKIYY 443
           EKIV +++++I +   +  + +      C   I     KIY+
Sbjct: 269 EKIVWLHLVYISFLGIICAADVFYICHVCYATIQEVRAKIYF 310


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 374 YKQSTNKSIVNYWKNIFTQNAIFLCY*FVFF 282
           Y  +T   I  Y K  +  NA+ +   F+FF
Sbjct: 248 YFFTTGNIIATYDKQFYIHNALIVRALFLFF 278


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 374 YKQSTNKSIVNYWKNIFTQNAIFLCY*FVFF 282
           Y  +T   I  Y K  +  NA+ +   F+FF
Sbjct: 244 YFFTTGNIIATYDKQFYIHNALIVRALFLFF 274


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 590 FNDQYLRGKNC 558
           F+ QY +GKNC
Sbjct: 231 FSCQYYQGKNC 241


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 590 FNDQYLRGKNC 558
           F+ QY +GKNC
Sbjct: 251 FSCQYYQGKNC 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,937
Number of Sequences: 336
Number of extensions: 3472
Number of successful extensions: 25
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)