Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0390
         (593 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011415-1|AAR96207.1|  994|Drosophila melanogaster AT14917p pro...    28   8.3  
AF214522-1|AAF24501.1|  419|Drosophila melanogaster SP295 protein.     28   8.3  
AE014297-1735|AAF54973.2|  994|Drosophila melanogaster CG9591-PA...    28   8.3  
AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA...    28   8.3  

>BT011415-1|AAR96207.1|  994|Drosophila melanogaster AT14917p
           protein.
          Length = 994

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
 Frame = +2

Query: 335 SWYLRLAAYVSGRVLLVILPLTHSCNQ-IICN----LLILSNAKFAVKFAMDKSYEKLKL 499
           +W L L A +S +     + +T SCN  + C+    L+ L N+ F  K    +    +++
Sbjct: 124 NWSLELVAKLSDKYTQRRMTITASCNYWLECSAMHGLMTLINSCFR-KLTQPEEEACVEI 182

Query: 500 ELNLFERYAYRMKWAV 547
            LN F R+     W V
Sbjct: 183 MLNAFHRFPMTFDWIV 198


>AF214522-1|AAF24501.1|  419|Drosophila melanogaster SP295 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 368 LKHRLQVLNTKKGNLSISNRKYDHGKTTIKGGNYK 264
           ++H LQ  N +KGN    NR+  H K T +  N K
Sbjct: 170 MEHSLQRANCQKGNHRRGNRRMLHNKITEREKNKK 204


>AE014297-1735|AAF54973.2|  994|Drosophila melanogaster CG9591-PA
           protein.
          Length = 994

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
 Frame = +2

Query: 335 SWYLRLAAYVSGRVLLVILPLTHSCNQ-IICN----LLILSNAKFAVKFAMDKSYEKLKL 499
           +W L L A +S +     + +T SCN  + C+    L+ L N+ F  K    +    +++
Sbjct: 124 NWSLELVAKLSDKYTQRRMTITASCNYWLECSAMHGLMTLINSCFR-KLTQPEEEACVEI 182

Query: 500 ELNLFERYAYRMKWAV 547
            LN F R+     W V
Sbjct: 183 MLNAFHRFPMTFDWIV 198


>AE013599-534|AAF59173.2|  403|Drosophila melanogaster CG17853-PA
           protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = +2

Query: 299 GHIFGLICLNCL-----SWYLRLAAYVSGRVLLVILPLTHSCNQIICNLLILSNAKF-AV 460
           G I G+I +N +     S    +  YV   VLL   PL   CN I+ +   L++A F + 
Sbjct: 280 GSILGIIMINMVLFADQSTRFGIVIYVMA-VLLQTFPLCFYCNAIVDDCKELAHALFHSA 338

Query: 461 KFAMDKSYEKLKLE 502
            +  DK Y++  ++
Sbjct: 339 WWVQDKRYQRTVIQ 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,161,802
Number of Sequences: 53049
Number of extensions: 477221
Number of successful extensions: 872
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)