Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0385
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.91 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   3.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 238 FIYTYCNREIRXLNASDXFFWSAGRTF 318
           F Y Y +  IR ++    FFWS  R +
Sbjct: 553 FCYCYYSISIRPISTLGWFFWSLLRIY 579


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 483 TPLLYQGSDSGPRECKGSR 427
           TP  Y     GPR C G R
Sbjct: 423 TPYTYLPFGEGPRNCIGQR 441


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 432  SPCTLSAQSQNLGRVGGSRGQHYNQTAAPSLGCPNRQF 545
            SPC  SA   +  R G  R  + ++    SLG  +  F
Sbjct: 929  SPCRNSASPASSDRSGTPRSTNGDRKPGGSLGALSSMF 966


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 163  VTTTYRDQKMEIGNYLT 213
            V  TY + K EIG Y+T
Sbjct: 1260 VNFTYFEDKNEIGVYIT 1276


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 163  VTTTYRDQKMEIGNYLT 213
            V  TY + K EIG Y+T
Sbjct: 1260 VNFTYFEDKNEIGVYIT 1276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,378
Number of Sequences: 336
Number of extensions: 3437
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)