Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0385
         (627 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY515311-1|AAS87212.1|  924|Homo sapiens sONE protein.                 33   1.1  
AK096734-1|BAC04853.1|  340|Homo sapiens protein ( Homo sapiens ...    33   1.1  
AF263313-1|AAG38503.1| 1049|Homo sapiens STE20-like kinase protein.    32   1.4  
AB020688-1|BAA74904.2| 1064|Homo sapiens KIAA0881 protein protein.     32   1.4  
BC110605-1|AAI10606.1|  318|Homo sapiens EPN3 protein protein.         30   7.7  
BC110602-1|AAI10603.1|  535|Homo sapiens EPN3 protein protein.         30   7.7  
AK000785-1|BAA91378.1|  632|Homo sapiens protein ( Homo sapiens ...    30   7.7  
AF324241-1|AAG45223.1|  632|Homo sapiens epsin 3 protein.              30   7.7  

>AY515311-1|AAS87212.1|  924|Homo sapiens sONE protein.
          Length = 924

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 378 VEGTPRTQECFRALPLNDSPCTLSAQSQNLGRVGGSRGQHYNQTAAPSLGCPNRQ 542
           ++GT  +Q C  ALP+  +P T +  +        S G H     AP+   P++Q
Sbjct: 78  LQGTGASQSCHSALPIPATPPTQAQPAMTPASASPSWGSHSTPPLAPATPTPSQQ 132


>AK096734-1|BAC04853.1|  340|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39415 fis, clone PLACE6016160. ).
          Length = 340

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 378 VEGTPRTQECFRALPLNDSPCTLSAQSQNLGRVGGSRGQHYNQTAAPSLGCPNRQ 542
           ++GT  +Q C  ALP+  +P T +  +        S G H     AP+   P++Q
Sbjct: 78  LQGTGASQSCHSALPIPATPPTQAQPAMTPASASPSWGSHSTPPLAPATPTPSQQ 132


>AF263313-1|AAG38503.1| 1049|Homo sapiens STE20-like kinase protein.
          Length = 1049

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 452  PESEPW*SRGVPRSTLQPNRGAIPRMPEPXVWTTPSTVSIPQP 580
            P +  W SR VPRS    + G  P    P  W  PS ++ P P
Sbjct: 936  PPAPAWPSRPVPRSGAHWSHGPPPPGMPPPAWRQPSLLAPPGP 978


>AB020688-1|BAA74904.2| 1064|Homo sapiens KIAA0881 protein protein.
          Length = 1064

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 452  PESEPW*SRGVPRSTLQPNRGAIPRMPEPXVWTTPSTVSIPQP 580
            P +  W SR VPRS    + G  P    P  W  PS ++ P P
Sbjct: 951  PPAPAWPSRPVPRSGAHWSHGPPPPGMPPPAWRQPSLLAPPGP 993


>BC110605-1|AAI10606.1|  318|Homo sapiens EPN3 protein protein.
          Length = 318

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 537 GSGILGMAPRFG--CSVDRGTPLLYQGSDSGPR 445
           GSG LG + R+G   S  RG+P  Y  S S PR
Sbjct: 162 GSGQLGFSRRYGEDYSRSRGSPSSYNSSSSSPR 194


>BC110602-1|AAI10603.1|  535|Homo sapiens EPN3 protein protein.
          Length = 535

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 537 GSGILGMAPRFG--CSVDRGTPLLYQGSDSGPR 445
           GSG LG + R+G   S  RG+P  Y  S S PR
Sbjct: 178 GSGQLGFSRRYGEDYSRSRGSPSSYNSSSSSPR 210


>AK000785-1|BAA91378.1|  632|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20778 fis, clone COL05704. ).
          Length = 632

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 537 GSGILGMAPRFG--CSVDRGTPLLYQGSDSGPR 445
           GSG LG + R+G   S  RG+P  Y  S S PR
Sbjct: 162 GSGQLGFSRRYGEDYSRSRGSPSSYNSSSSSPR 194


>AF324241-1|AAG45223.1|  632|Homo sapiens epsin 3 protein.
          Length = 632

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -1

Query: 537 GSGILGMAPRFG--CSVDRGTPLLYQGSDSGPR 445
           GSG LG + R+G   S  RG+P  Y  S S PR
Sbjct: 162 GSGQLGFSRRYGEDYSRSRGSPSSYNSSSSSPR 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,394,768
Number of Sequences: 237096
Number of extensions: 2131782
Number of successful extensions: 4668
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4667
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)