Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0384
         (573 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    26   1.0  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             23   9.3  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   9.3  

>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 520 RKGGVPVWTHKRSYHHKNILYGLILM 443
           R+  VP W     YHH +I+YG++ +
Sbjct: 162 RRLPVPAW-FPVDYHHSDIVYGVLFL 186


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 461 QYIFMVVGPLVSPHG 505
           QY+ +  GP  +PHG
Sbjct: 237 QYVLLPAGPPCAPHG 251


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -3

Query: 514 GGVPVWTHKRS-YHH 473
           GGV  WT+KRS  HH
Sbjct: 43  GGVVGWTNKRSPIHH 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,874
Number of Sequences: 2352
Number of extensions: 9185
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)