Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0382
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   5.6  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   5.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -1

Query: 682 YQSTKGSAE*PMVDALKFSVALL*NFIRVAYKPFG*TMVSALKFSVP 542
           Y+  K       V+ +KF++ LL   +      FG T++  + F+VP
Sbjct: 178 YRHQKNFINESNVETVKFNLFLLSQAVETFNDIFGWTILQTVFFTVP 224


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 109 YSEWRSISQDEIISSVVFYENLLRTATRIL 198
           Y+ W+++  DE+++     EN   TA  I+
Sbjct: 677 YTGWKNMLSDELLAQPTIKEN-FHTALEIM 705


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 339 WSDQVSECLDMRLSHALHC 395
           W+DQV EC +  ++    C
Sbjct: 139 WADQVPECKNEEVAGGFTC 157


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 339 WSDQVSECLDMRLSHALHC 395
           W+DQV EC +  ++    C
Sbjct: 139 WADQVPECKNEEVAGGFTC 157


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 315 SRGRSRKRWSDQVSECLDMRLSHALHCATDRHKWLK 422
           +RG+ RKR  D       M+   A +    +++W K
Sbjct: 553 TRGKKRKRKQDPADGGNSMKKCRARYGLDQQNQWCK 588


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 315 SRGRSRKRWSDQVSECLDMRLSHALHCATDRHKWLK 422
           +RG+ RKR  D       M+   A +    +++W K
Sbjct: 445 TRGKKRKRKQDPADGGNSMKKCRARYGLDQQNQWCK 480


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = +2

Query: 620 SNTKFQCIHHWLLCTT 667
           +NT ++C++ W++  T
Sbjct: 157 NNTTWRCLYRWIVLYT 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,590
Number of Sequences: 336
Number of extensions: 3509
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)