Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0381
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 421 NPELIACHHSINSQEGYDWKLWLLAGT 501
           +P ++  +  I+ Q  + W LWLL+ T
Sbjct: 449 SPPVVFLNDFISHQHAWIWLLWLLSQT 475


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 421 NPELIACHHSINSQEGYDWKLWLLAGT 501
           +P ++  +  I+ Q  + W LWLL+ T
Sbjct: 449 SPPVVFLNDFISHQHAWIWLLWLLSQT 475


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 421 NPELIACHHSINSQEGYDWKLWLLAGT 501
           +P ++  +  I+ Q  + W LWLL+ T
Sbjct: 449 SPPVVFLNDFISHQHAWIWLLWLLSQT 475


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 421 NPELIACHHSINSQEGYDWKLWLLAGT 501
           +P ++  +  I+ Q  + W LWLL+ T
Sbjct: 449 SPPVVFLNDFISHQHAWIWLLWLLSQT 475


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 570 WLPEPIDIYNVNAPPTLRYKL 632
           WL  P  + N   P +LR+KL
Sbjct: 7   WLTPPHSLGNTVTPVSLRFKL 27


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = -3

Query: 499 YQPVARASSHNPLGY*YYDDKQLVPDCRVEWAMQLNSTSV 380
           Y+P     +H P    + + KQ++      W+ Q + TS+
Sbjct: 525 YRPWQTVYNHRPWQQLHLNKKQILGGEACLWSEQFDETSL 564


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 668 GGAAVVTILETLQLISQGGWRV 603
           G A ++   E ++L  +GGW+V
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -1

Query: 213 TISLGRKKKCLK 178
           +I+L RKKKC++
Sbjct: 629 SIALSRKKKCIR 640


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -1

Query: 213 TISLGRKKKCLK 178
           +I+L RKKKC++
Sbjct: 521 SIALSRKKKCIR 532


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,098
Number of Sequences: 336
Number of extensions: 3216
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)