Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0381
         (693 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical...    28   7.3  
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical...    28   7.3  

>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
           protein Y43F8B.3b protein.
          Length = 1398

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 486 ATGWYSQGCVESSLSLDGRTSSRPAQCKWLPEPIDIYNVNAPPTLRY 626
           A  W   G V         + + P  C+ LPE   +    APPT R+
Sbjct: 665 ADHWCHLGLVPDEYQCCPGSPTNPGACQGLPESEGVTGAPAPPTSRW 711


>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
            protein Y43F8B.3a protein.
          Length = 1816

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 486  ATGWYSQGCVESSLSLDGRTSSRPAQCKWLPEPIDIYNVNAPPTLRY 626
            A  W   G V         + + P  C+ LPE   +    APPT R+
Sbjct: 1083 ADHWCHLGLVPDEYQCCPGSPTNPGACQGLPESEGVTGAPAPPTSRW 1129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,158,528
Number of Sequences: 27780
Number of extensions: 301723
Number of successful extensions: 501
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)