Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0380
         (658 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4S0G8 Cluster: Chromosome 2 SCAF14781, whole genome sh...    68   2e-10
UniRef50_Q9W2U2 Cluster: CG32687-PA; n=8; Endopterygota|Rep: CG3...    65   1e-09
UniRef50_Q96CX6 Cluster: Leucine-rich repeat-containing protein ...    65   2e-09
UniRef50_A7SVP7 Cluster: Predicted protein; n=1; Nematostella ve...    64   4e-09
UniRef50_Q9N4Z5 Cluster: Putative uncharacterized protein; n=3; ...    51   2e-05
UniRef50_Q0PND3 Cluster: Triacylglycerol lipase; n=2; Magnaporth...    34   2.6  
UniRef50_Q3KBE5 Cluster: Filamentous haemagglutinin-like precurs...    34   3.5  
UniRef50_Q24GM6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  

>UniRef50_Q4S0G8 Cluster: Chromosome 2 SCAF14781, whole genome
           shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 2
           SCAF14781, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 384

 Score = 67.7 bits (158), Expect = 2e-10
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = -3

Query: 413 QLSLRDNPLVVRSVRDMTLQPPSLLELAGRTVKLHNIPIETGGIPKTLINYL 258
           +LSLR NPLVVR V++MT  PPSLLELAGRT+K  NIP     +P  L+ YL
Sbjct: 228 ELSLRGNPLVVRFVKEMTYDPPSLLELAGRTIKSRNIPYYPCDLPANLLRYL 279


>UniRef50_Q9W2U2 Cluster: CG32687-PA; n=8; Endopterygota|Rep:
           CG32687-PA - Drosophila melanogaster (Fruit fly)
          Length = 377

 Score = 65.3 bits (152), Expect = 1e-09
 Identities = 35/64 (54%), Positives = 40/64 (62%)
 Frame = -3

Query: 413 QLSLRDNPLVVRSVRDMTLQPPSLLELAGRTVKLHNIPIETGGIPKTLINYLQQPNVVSI 234
           +LSLRDNPLVVR V+DM L+PP+LLELAGR VK          IP+TL  YL   N    
Sbjct: 251 ELSLRDNPLVVRFVQDMALKPPTLLELAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVN 310

Query: 233 QNAK 222
            N K
Sbjct: 311 PNCK 314


>UniRef50_Q96CX6 Cluster: Leucine-rich repeat-containing protein 58;
           n=30; Deuterostomia|Rep: Leucine-rich repeat-containing
           protein 58 - Homo sapiens (Human)
          Length = 403

 Score = 64.9 bits (151), Expect = 2e-09
 Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
 Frame = -3

Query: 413 QLSLRDNPLVVRSVRDMTLQPPSLLELAGRTVKLHNIPIETGGIPKTLINYLQQPNVVSI 234
           +LSLR NPLVVR VRD+T  PP+LLELA RT+K+ NI      +P  L+ YL   +  + 
Sbjct: 271 ELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYDLPGNLLRYLGSAS--NC 328

Query: 233 QNAKV***YYYCNI-*IVFVLACVQIRPSYLNNKYTLYKVEPRCVHHC 93
            N K    Y+ C +  I FV  C + R   ++     Y   P C   C
Sbjct: 329 PNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMH-----YLCSPECSSPC 371


>UniRef50_A7SVP7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 358

 Score = 63.7 bits (148), Expect = 4e-09
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = -3

Query: 413 QLSLRDNPLVVRSVRDMTLQPPSLLELAGRTVKLHNIPIETGGIPKTLINYL 258
           +LSLRDNPLVVR VRDM  +PPSLLEL+GR +K +++      +P  L++YL
Sbjct: 227 ELSLRDNPLVVRFVRDMAFKPPSLLELSGRCIKNNSVRYSKEDLPPQLLSYL 278


>UniRef50_Q9N4Z5 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 375

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = -3

Query: 413 QLSLRDNPLVVRSVRDMTLQPPSLLELAGRTVK--LHNIPIETGGIPKTLINYL 258
           QLSLR+NPLV   V +M L PPSL EL+GRTV+   H +P     +P  L+ YL
Sbjct: 248 QLSLRNNPLVHSFVHNMDLAPPSLKELSGRTVRQNYHKVPNLDEILPSDLVAYL 301


>UniRef50_Q0PND3 Cluster: Triacylglycerol lipase; n=2; Magnaporthe
           grisea|Rep: Triacylglycerol lipase - Magnaporthe grisea
           (Rice blast fungus) (Pyricularia grisea)
          Length = 534

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 20/50 (40%), Positives = 28/50 (56%)
 Frame = -3

Query: 389 LVVRSVRDMTLQPPSLLELAGRTVKLHNIPIETGGIPKTLINYLQQPNVV 240
           LV  +V DMT Q     E  GR + +  +    GG+P T++NYL  PNV+
Sbjct: 201 LVRDNVGDMTFQ--EAFERTGRALNITVVSSGQGGVP-TVLNYLSTPNVL 247


>UniRef50_Q3KBE5 Cluster: Filamentous haemagglutinin-like precursor;
            n=1; Pseudomonas fluorescens PfO-1|Rep: Filamentous
            haemagglutinin-like precursor - Pseudomonas fluorescens
            (strain PfO-1)
          Length = 4170

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 13/37 (35%), Positives = 26/37 (70%)
 Frame = -3

Query: 413  QLSLRDNPLVVRSVRDMTLQPPSLLELAGRTVKLHNI 303
            +++L    LV++SV D+TL   + L++AGRT+  +++
Sbjct: 2314 RIALASGKLVIKSVEDLTLNSGAYLDMAGRTLAFNDV 2350


>UniRef50_Q24GM6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1403

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +2

Query: 158 VFEHKLIQKQFICYNNSTTIIPLH 229
           +FE +++QK+FIC+NN T +  L+
Sbjct: 18  IFEQQIMQKRFICFNNQTVLKQLY 41


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,221,702
Number of Sequences: 1657284
Number of extensions: 12813138
Number of successful extensions: 22690
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22688
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)