Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0380
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013757-1|AAH13757.1|  403|Homo sapiens LRRC58 protein protein.       65   2e-10

>BC013757-1|AAH13757.1|  403|Homo sapiens LRRC58 protein protein.
          Length = 403

 Score = 64.9 bits (151), Expect = 2e-10
 Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
 Frame = -3

Query: 413 QLSLRDNPLVVRSVRDMTLQPPSLLELAGRTVKLHNIPIETGGIPKTLINYLQQPNVVSI 234
           +LSLR NPLVVR VRD+T  PP+LLELA RT+K+ NI      +P  L+ YL   +  + 
Sbjct: 271 ELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYDLPGNLLRYLGSAS--NC 328

Query: 233 QNAKV***YYYCNI-*IVFVLACVQIRPSYLNNKYTLYKVEPRCVHHC 93
            N K    Y+ C +  I FV  C + R   ++     Y   P C   C
Sbjct: 329 PNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMH-----YLCSPECSSPC 371


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,838,195
Number of Sequences: 237096
Number of extensions: 2059459
Number of successful extensions: 2848
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2840
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)