Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0379
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    26   0.34 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.79 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   1.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   2.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.4  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.4  

>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -2

Query: 268 VNYNHSNFFFICCSSHRQFFRLAAFRFIVRLYRLSPLS 155
           VN N++    IC ++H+Q F+L  +  +V  +   PL+
Sbjct: 204 VNENNTTVNNICQATHKQLFQLVQWAKLVPHFTSLPLT 241


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +1

Query: 460 HLKFY--FNVFLIVYCIYNSIYYYKLGVFLCI 549
           HL FY  F +F + + +    +YY   + LC+
Sbjct: 82  HLLFYCPFIIFTVHFLLCTYYFYYAFIILLCV 113



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 469 FYFNVFLIVYCIYNSIYYYKLGVF 540
           +++  F+I+ C+Y   +YY   +F
Sbjct: 102 YFYYAFIILLCVY--YFYYAFIIF 123


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 382 KSQWPTITYSYYIYGQRVLAATRVKRHLK 468
           K +W    Y Y++ G R L    +  H K
Sbjct: 120 KKRWSQCMYMYFLLGFRYLVNDELSAHSK 148


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 382 KSQWPTITYSYYIYGQRVLAATRVKRHLK 468
           K +W    Y Y++ G R L    +  H K
Sbjct: 434 KKRWSQCMYMYFLLGFRYLVNDELSAHSK 462


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 382 KSQWPTITYSYYIYGQRVL 438
           + +W  + Y YY+ G R++
Sbjct: 695 RKRWSQVMYMYYLLGHRLM 713


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 382 KSQWPTITYSYYIYGQRVL 438
           + +W  + Y YY+ G R++
Sbjct: 695 RKRWSQVMYMYYLLGHRLM 713


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 382 KSQWPTITYSYYIYGQRVLAATRVKRHLK 468
           K +W    Y Y++ G R+ A   +  H K
Sbjct: 667 KKRWSQCMYMYFLLGFRLQANDELSAHSK 695


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 382 KSQWPTITYSYYIYGQRVLAATRVKRHLK 468
           K +W    Y Y++ G R+ A   +  H K
Sbjct: 667 KKRWSQCMYMYFLLGFRLQANDELSAHSK 695


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 382 KSQWPTITYSYYIYGQRVL 438
           + +W  + Y YY+ G R++
Sbjct: 695 RKRWSQVMYMYYLLGHRLM 713


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 382 KSQWPTITYSYYIYGQRVL 438
           + +W  + Y YY+ G R++
Sbjct: 695 RKRWSQVMYMYYLLGHRLM 713


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 466 LSDASLGLLPKLSDHIYNKNK*WWATEI 383
           L+D S+GL+  L+D I+     W+A  +
Sbjct: 68  LADLSVGLINVLTDIIWKTTVAWYAGNV 95


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 46  ISFTLSLFYKKKKITYLI 99
           ISF   +F+K KK+ YL+
Sbjct: 155 ISFESKVFHKLKKMKYLV 172


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 457 RHLKFYFNVFLIVYCIYNSIYYYKLGVFLCIK 552
           + ++  +  F  VY +YN    + +G+F  +K
Sbjct: 57  QEIRLEWKSFRFVYAVYNIFGAFVMGLFCILK 88


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +3

Query: 12  LIFHVV*FMYQHFFHPIIVLQKKKNYLFDNIRKLSTFIIH 131
           ++F ++   Y   F  ++ +   K Y F+ I+  S FI++
Sbjct: 108 VLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILY 147


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +3

Query: 12  LIFHVV*FMYQHFFHPIIVLQKKKNYLFDNIRKLSTFIIH 131
           ++F ++   Y   F  ++ +   K Y F+ I+  S FI++
Sbjct: 108 VLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILY 147


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +3

Query: 12  LIFHVV*FMYQHFFHPIIVLQKKKNYLFDNIRKLSTFIIH 131
           ++F ++   Y   F  ++ +   K Y F+ I+  S FI++
Sbjct: 428 VLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILY 467


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 111 LSTFIIHSF*IRQ*ADKGLSL 173
           L TF+I  F +++ A KGL L
Sbjct: 63  LGTFLISGFQMQKIATKGLDL 83


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 111 LSTFIIHSF*IRQ*ADKGLSL 173
           L TF+I  F +++ A KGL L
Sbjct: 63  LGTFLISGFQMQKIATKGLDL 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,148
Number of Sequences: 336
Number of extensions: 2982
Number of successful extensions: 24
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)