Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0379
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    27   0.57 
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    27   0.57 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.3  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 382 KSQWPTITYSYYIYGQRVLAA-TRVKRHLKFYFNVFLI 492
           K +W  + Y YY+ G R++   T  +R +    N +L+
Sbjct: 354 KKRWSQVMYMYYLLGYRIMQLNTSPERKMVIAQNTYLL 391


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = +2

Query: 542 CVLNVNNRCSRLVRNHWNRTVATWAVTVFFLSKKKICGNSCSVNVLFVELTSK 700
           C+  +N     ++   W   V  W++++ +L+   I   S +V V+F   T++
Sbjct: 258 CIRLLNTSIRSMLMLQWLTCVLNWSISLIYLTNVGISLQSVTVVVMFFLATAE 310


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +2

Query: 323 LLLKTMNYLIFLDINDPISKNLSGPPLLILIIYMVREFWQQP 448
           L+L    +L+  D+N+  +  +S   L+++ I  +++  Q+P
Sbjct: 411 LVLVLKQFLLQRDLNEVFTGGISSYSLILMCISFLQQHHQKP 452


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,497
Number of Sequences: 2352
Number of extensions: 10346
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)