Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0379
         (701 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK223482-1|BAD97202.1|  700|Homo sapiens MYB-related protein B v...    31   3.0  
X13293-1|CAA31655.1|  700|Homo sapiens protein ( Human mRNA for ...    30   9.2  
BC053555-1|AAH53555.1|  700|Homo sapiens v-myb myeloblastosis vi...    30   9.2  
BC007585-1|AAH07585.1|  700|Homo sapiens v-myb myeloblastosis vi...    30   9.2  
AL121886-2|CAC08392.1|  700|Homo sapiens v-myb myeloblastosis vi...    30   9.2  

>AK223482-1|BAD97202.1|  700|Homo sapiens MYB-related protein B
           variant protein.
          Length = 700

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 563 RCSRLVRNHWNRTVATWAVTVFFLSKKKIC 652
           R    V+NHWN T+   A T  FLS+ K C
Sbjct: 167 RTDNAVKNHWNSTIKRKADTGGFLSESKDC 196


>X13293-1|CAA31655.1|  700|Homo sapiens protein ( Human mRNA for
           B-myb gene. ).
          Length = 700

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 563 RCSRLVRNHWNRTVATWAVTVFFLSKKKIC 652
           R    V+NHWN T+     T  FLS+ K C
Sbjct: 167 RTDNAVKNHWNSTIKRKVDTGGFLSESKDC 196


>BC053555-1|AAH53555.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 563 RCSRLVRNHWNRTVATWAVTVFFLSKKKIC 652
           R    V+NHWN T+     T  FLS+ K C
Sbjct: 167 RTDNAVKNHWNSTIKRKVDTGGFLSESKDC 196


>BC007585-1|AAH07585.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 563 RCSRLVRNHWNRTVATWAVTVFFLSKKKIC 652
           R    V+NHWN T+     T  FLS+ K C
Sbjct: 167 RTDNAVKNHWNSTIKRKVDTGGFLSESKDC 196


>AL121886-2|CAC08392.1|  700|Homo sapiens v-myb myeloblastosis viral
           oncogene homolog (avian)-like 2 protein.
          Length = 700

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 563 RCSRLVRNHWNRTVATWAVTVFFLSKKKIC 652
           R    V+NHWN T+     T  FLS+ K C
Sbjct: 167 RTDNAVKNHWNSTIKRKVDTGGFLSESKDC 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,541,113
Number of Sequences: 237096
Number of extensions: 1474389
Number of successful extensions: 2088
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2088
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)