Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0378
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   5.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.7  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +1

Query: 58  NHTTSLLAFPPKSPXXXXXXXXXXXXXDYQNKPITDFGGNAKSEVVSIIL 207
           N T  ++ +  K+              DYQNK +  F   A++    IIL
Sbjct: 387 NATPEIITYLEKNGKPRTTDTFLDLWSDYQNKSLAAFDFVARNSDTPIIL 436


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 210 VFNSVFII*VYICINMAY 263
           VF+ V+ I  + CI++AY
Sbjct: 163 VFDLVYFILAFACISIAY 180


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 586 IVFRFILNK*IKSISLHDVMAFNCRSDLSELVIN 485
           I+F F +   I  + L+ ++A N  S+ + LV+N
Sbjct: 241 IIFLFFIIPLIILLILYCIIAKNLMSNAATLVLN 274


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 504 KSLLQLNAITSCNEMDLIYL 563
           K L+ LN  TS  E+D +YL
Sbjct: 250 KILVALNFFTSTLEIDNLYL 269


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,067
Number of Sequences: 336
Number of extensions: 2940
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)