Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0377
(700 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 89 7e-17
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 89 7e-17
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 89 7e-17
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 89 7e-17
UniRef50_UPI000155FB0E Cluster: PREDICTED: hypothetical protein;... 64 4e-09
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 63 6e-09
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 63 7e-09
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 48 2e-04
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 46 9e-04
UniRef50_Q96ME4 Cluster: CDNA FLJ32471 fis, clone SKNMC2000322, ... 43 0.006
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.034
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.078
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 40 0.078
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 38 0.18
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 36 0.96
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 33 6.7
UniRef50_UPI00015B4DE7 Cluster: PREDICTED: hypothetical protein;... 33 8.9
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 33 8.9
UniRef50_Q22VV5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 89.4 bits (212), Expect = 7e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +3
Query: 273 RRDWENPGVTQLXRLAAHPPFASWRNSEEARTDRPSQQLR 392
RRDWENPGVTQL RLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 74 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 89.4 bits (212), Expect = 7e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +3
Query: 273 RRDWENPGVTQLXRLAAHPPFASWRNSEEARTDRPSQQLR 392
RRDWENPGVTQL RLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 28 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 67
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 89.4 bits (212), Expect = 7e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +3
Query: 273 RRDWENPGVTQLXRLAAHPPFASWRNSEEARTDRPSQQLR 392
RRDWENPGVTQL RLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 32 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 71
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 89.4 bits (212), Expect = 7e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +3
Query: 273 RRDWENPGVTQLXRLAAHPPFASWRNSEEARTDRPSQQLR 392
RRDWENPGVTQL RLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 14 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 53
>UniRef50_UPI000155FB0E Cluster: PREDICTED: hypothetical protein;
n=3; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 186
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = -3
Query: 188 EDQTQKSSLLSTMTVMTKAKRLFAMLKAKV*PVYDAEFTASSGLFK*FKN*CSLHDGKV 12
EDQTQK + LST V AK LF MLK K P Y+ EF ASSG F+ F+N SLH+ KV
Sbjct: 79 EDQTQKHNPLSTKMVTANAKSLFVMLKEKAGPDYNVEFNASSGCFEQFRNHYSLHNVKV 137
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 63.3 bits (147), Expect = 6e-09
Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 265 FYNVVTGKTLALPNXIALQHIPLSPAGVIAKRPAPIALPNS--CAXEWRMA 411
FYNVVTGKTLALPN IALQHIPLSPAGVI++ A P+ + +WRMA
Sbjct: 9 FYNVVTGKTLALPNLIALQHIPLSPAGVISEE-ARTDRPSQQLRSLKWRMA 58
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 62.9 bits (146), Expect = 7e-09
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +3
Query: 273 RRDWENPGVTQLXRLAAHPPFASWRNSEEARTDRPSQQ 386
RRDWENP +TQ RL AHPPF SWR+ E A+ DRPS Q
Sbjct: 21 RRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQ 58
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +3
Query: 273 RRDWENPGVTQLXRLAAHPPFASWRNSEEARTDRPSQQLR 392
R DW N +T L RL AHP FASWR+ AR + PS + R
Sbjct: 20 REDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 46.0 bits (104), Expect = 9e-04
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 273 RRDWENPGVTQLXRLAAHPPFASWRNSEEARTDRPS 380
R DW+NP +T + RL +H P WR+++ AR PS
Sbjct: 24 RNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_Q96ME4 Cluster: CDNA FLJ32471 fis, clone SKNMC2000322,
weakly similar to MAJOR CENTROMERE AUTOANTIGEN B; n=1;
Homo sapiens|Rep: CDNA FLJ32471 fis, clone SKNMC2000322,
weakly similar to MAJOR CENTROMERE AUTOANTIGEN B - Homo
sapiens (Human)
Length = 246
Score = 43.2 bits (97), Expect = 0.006
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = -3
Query: 206 LAVI*HEDQTQKSSLLSTMTVMTKAKRLFAMLKAKV-*PVYDAEFTASSGLFK*FKN*CS 30
L V+ EDQ QK LS + + KA+ LF MLK + P Y F AS G F+ FK +
Sbjct: 92 LLVMWMEDQIQKRIPLSLLMIQAKARSLFNMLKDRASDPTYTQMFKASHGWFQRFKRRHN 151
Query: 29 LHDGKV 12
H+ K+
Sbjct: 152 FHNVKI 157
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 40.7 bits (91), Expect = 0.034
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 342 WRNSEEARTDRPSQQLR 392
WRNSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.5 bits (88), Expect = 0.078
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -3
Query: 413 FAIRHSXAQLLGRAIGAGLFAITPAGERG 327
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 39.5 bits (88), Expect = 0.078
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 273 RRDWENPGVTQLXRLAAHPPFASWRNSEEARTDRPSQQ 386
RRDWENP Q+ ++ AH P ++ E+AR + SQ+
Sbjct: 10 RRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK 47
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 38.3 bits (85), Expect = 0.18
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2
Query: 699 GFRFSALRHLDPKKLD 652
GFRFSALRHLDPKKLD
Sbjct: 58 GFRFSALRHLDPKKLD 73
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 35.9 bits (79), Expect = 0.96
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 194 RSLQGGARYPIRPIVSRIT 250
R +GGARYPIRPIVSRIT
Sbjct: 257 RRPRGGARYPIRPIVSRIT 275
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 33.1 bits (72), Expect = 6.7
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3
Query: 260 GQEL*YDSL*GELGTGPPLAV 198
G+ YDSL GELGTGPPL V
Sbjct: 273 GRRAYYDSLYGELGTGPPLEV 293
>UniRef50_UPI00015B4DE7 Cluster: PREDICTED: hypothetical protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
- Nasonia vitripennis
Length = 1298
Score = 32.7 bits (71), Expect = 8.9
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 486 PKSAKSLIIKRIDRDRVECCSSLEQESTIKERGLQRQRAKNRLSGRWAHYVNHH 647
P + L +R R R ECC+ E + T G ++ R K LS W ++ N+H
Sbjct: 936 PDQPQKLKTER-QRQRAECCT--EGKKTATTAGKKKSRGKQDLSPIWVNHNNNH 986
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 32.7 bits (71), Expect = 8.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 276 RDWENPGVTQLXRLAAHPPFASWRNSEEA 362
R+WEN +TQ+ R H P+ ++ + E+A
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQA 31
>UniRef50_Q22VV5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 485
Score = 32.7 bits (71), Expect = 8.9
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 57 QPRASSKFSIIDRSNLCFQHSKQ---SFCFSHNCHGAEKARLLCL 182
Q ASSK + + + C +H + CF+HNC ++RLLCL
Sbjct: 81 QQNASSKIQLANLNLKCQEHEQNPIVGICFAHNCE--YQSRLLCL 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,623,629
Number of Sequences: 1657284
Number of extensions: 14000022
Number of successful extensions: 31063
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 30069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31054
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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