Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0376
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.064
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    28   0.084
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.4  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   2.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.064
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 180 FYLCS*---VKNVFYSCINLFYIYTQACYYVFIF*CDKLICIYFLFLTYL 320
           F LCS    V  +FY    +F ++   C Y F +    L+C+Y+ +  ++
Sbjct: 72  FLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFI 121



 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +3

Query: 210 FYSCINLFYIYTQ--ACYYVFIF*CDKLICIYFLFLTYL 320
           FY    +F ++     C Y F+     L+CIY+ +  ++
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFI 154



 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +3

Query: 435 VVCFFHVILMNIYYAILVLIFINYYIKLLC 524
           +VC ++   M++ +    +IF  + + LLC
Sbjct: 255 LVCIYYFYYMHLLFCCAFIIFTMHLLFLLC 284



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 453 VILMNIYYAILVLIFINYYIKLLCHFLV 536
           + L+ IYY ++ L F+       C F++
Sbjct: 128 LFLLCIYYFVVPLFFLLCIYYFYCAFII 155


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 27.9 bits (59), Expect = 0.084
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 483 LVLIFINYYIKLLCHFLVPILGVLINTVVP 572
           L+L F++Y++ LLC  LV I  + + T  P
Sbjct: 390 LILSFVDYFVFLLCSILVNIAFIKLATEWP 419


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 202 KMYFILVLIYFIFTHRPAIMCLFF 273
           KM  I+VL++F+      +MC+++
Sbjct: 275 KMTIIIVLVFFVCWTPYYVMCIWY 298


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 202 KMYFILVLIYFIFTHRPAIMCLFF 273
           KM  I+VL++F+      +MC+++
Sbjct: 275 KMTIIIVLVFFVCWTPYYVMCIWY 298


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 583 TNIYGTTVLIKTPKI 539
           T ++GTTV ++ PK+
Sbjct: 74  TKVHGTTVRVRPPKV 88


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 583 TNIYGTTVLIKTPKI 539
           T ++GTTV ++ PK+
Sbjct: 388 TKVHGTTVRVRPPKV 402


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 583 TNIYGTTVLIKTPKI 539
           T ++GTTV ++ PK+
Sbjct: 621 TKVHGTTVRVRPPKV 635


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 583 TNIYGTTVLIKTPKI 539
           T ++GTTV ++ PK+
Sbjct: 621 TKVHGTTVRVRPPKV 635


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,634
Number of Sequences: 336
Number of extensions: 3643
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)