Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0376
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81056-1|CAB02902.1|  319|Caenorhabditis elegans Hypothetical pr...    32   0.45 
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li...    29   3.2  
Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81047-6|CAB02833.2|  381|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p...    27   9.8  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    27   9.8  
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr...    27   9.8  
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.       27   9.8  

>Z81056-1|CAB02902.1|  319|Caenorhabditis elegans Hypothetical
           protein F09F3.1 protein.
          Length = 319

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +3

Query: 426 NFKVVCFFHVILMNIYYAILVLIFINYYIKLLCHFLVPILGVLINTVVP*ILVC 587
           N  V C F    + +  A L    +NYY+      + P+   ++NT++P  L C
Sbjct: 64  NSIVCCSFLFFAVPVICATLTFSQVNYYLNRTMGMVSPLWSYILNTLIPICLSC 117


>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
           protein F31D5.5 protein.
          Length = 1788

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 443 LFPCNFNEYLLCNSRTYLYQL 505
           ++  + N YLLCN RT  YQL
Sbjct: 610 IYQLSINTYLLCNDRTCTYQL 630


>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
           protein MTH-1 protein.
          Length = 1757

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 443 LFPCNFNEYLLCNSRTYLYQL 505
           ++  + N YLLCN RT  YQL
Sbjct: 579 IYQLSINTYLLCNDRTCTYQL 599


>Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical
           protein F01D4.7 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 429 FKVVCFFHVILMNIYYAILVLIFINYYIKLLCHFLVPIL 545
           F +V  +H++L  I    ++  F+NY   L  HF + IL
Sbjct: 25  FLLVKLYHILLSVISMGSIIYFFLNYSNLLAFHFNIKIL 63


>Z81047-6|CAB02833.2|  381|Caenorhabditis elegans Hypothetical
           protein C41G6.8 protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +1

Query: 472 IMQFSYLSLSIIILNYCVTFWYLF*EF*SIRLFHKYWFADLCSVL--IFLKSIIK 630
           +  F+    S+IIL  C+ FW L+  +    LF   W  D  S L  +  +S IK
Sbjct: 157 VKNFTAAKGSVIILIICLMFWILYSTW-QFALFRVLWLPDNASELCQVMFESSIK 210


>Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical
           protein F20E11.1 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +3

Query: 207 VFYSCINLFYIYTQACYYVFIF*CDKLICIYFLFLTYLSNKNLDLNSIWIKLDHI 371
           +F++  N+ YI TQA ++V IF    ++ +   F+ +  +      S+ IK+ H+
Sbjct: 104 LFFALFNVLYIITQA-FHVLIF----VLAVERFFIYFFPSSEKIFKSLSIKIKHL 153


>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
           protein ZK524.2e protein.
          Length = 1816

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
           protein ZK524.2d protein.
          Length = 2155

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
           protein ZK524.2a protein.
          Length = 1813

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
          Length = 1815

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 279 DKLICIYFLFLTYLSNKNLDLNSIWIKLDH-INCRNG 386
           DKLI ++++ L+ +   N   +  W+++DH +  RNG
Sbjct: 89  DKLIGVHYMPLSEIRYSNAAGSGQWLQMDHELETRNG 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,738,686
Number of Sequences: 27780
Number of extensions: 301662
Number of successful extensions: 619
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)