Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0376
(699 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 26 0.30
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 26 0.30
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 26 0.30
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 26 0.30
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.1
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.5
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 8.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.5
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 8.5
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.30
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -1
Query: 321 TNKLKIRNKYILTCHIKK*THNSRPVCKYKID*YKNKIHFSLNYINKI 178
T + + R I++ HN+ Y + Y K+++++NYI +I
Sbjct: 71 TERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQI 118
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.30
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -1
Query: 321 TNKLKIRNKYILTCHIKK*THNSRPVCKYKID*YKNKIHFSLNYINKI 178
T + + R I++ HN+ Y + Y K+++++NYI +I
Sbjct: 71 TERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQI 118
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.30
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -1
Query: 321 TNKLKIRNKYILTCHIKK*THNSRPVCKYKID*YKNKIHFSLNYINKI 178
T + + R I++ HN+ Y + Y K+++++NYI +I
Sbjct: 71 TERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQI 118
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.30
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -1
Query: 321 TNKLKIRNKYILTCHIKK*THNSRPVCKYKID*YKNKIHFSLNYINKI 178
T + + R I++ HN+ Y + Y K+++++NYI +I
Sbjct: 71 TERERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQI 118
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/12 (58%), Positives = 12/12 (100%)
Frame = -1
Query: 216 NKIHFSLNYINK 181
N+++F+LNY+NK
Sbjct: 54 NELNFNLNYVNK 65
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 6.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 478 QFSYLSLSIIILNYCVTF 531
+ SY+ LS I+L Y VTF
Sbjct: 693 ELSYVLLSGILLCYLVTF 710
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 107 NKLYYNINYIEQI 119
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 107 NKLYYNINYIEQI 119
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 107 NKLYYNINYIEQI 119
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 107 NKLYYNINYIEQI 119
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 107 NKLYYNINYIEQI 119
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 107 NKLYYNINYIEQI 119
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 107 NKLYYNINYIEQI 119
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 107 NKLYYNINYIEQI 119
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 107 NKLYYNINYIEQI 119
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 595 TGLQTNIYGTTVLIKTPKIGT 533
TG+ NI TV+IK P + T
Sbjct: 53 TGIFGNITTCTVIIKNPAMQT 73
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 340 NKLYYNINYIEQI 352
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = -1
Query: 216 NKIHFSLNYINKI 178
NK+++++NYI +I
Sbjct: 340 NKLYYNINYIEQI 352
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +3
Query: 540 ILG-VLINTVVP*ILVCRPVF 599
+LG +++ TV+ ILVC VF
Sbjct: 47 VLGSIIVGTVIGNILVCVAVF 67
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,899
Number of Sequences: 438
Number of extensions: 4304
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -