Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0375
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 556 FFLTILMKLLNIYFIDLVFPIIMGV 630
           FF T  ++   +YF+ L+ PI+  V
Sbjct: 543 FFFTANVQAGELYFMSLLNPILSNV 567


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +1

Query: 541 NSKSRFFLTILMKLLNIYFIDLVFPIIMGVIIWPELSIYPWYKFVLMF 684
           N   +FF+ +++ +L   F+  V+   MGV+    L  Y  + F +++
Sbjct: 134 NVSVQFFVYVILYILATVFLAYVWICEMGVV---TLQAYTLHLFCVLY 178


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 556 FFLTILMKLLNIYFIDLVFPIIMGV 630
           FF T  ++   +YF+ L+ PI+  V
Sbjct: 268 FFFTANVQAGELYFMSLLNPILSNV 292


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +1

Query: 541 NSKSRFFLTILMKLLNIYFIDLVFPIIMGVIIWPELSIYPWYKFVLMF 684
           N   +FF+ +++ +L   F+  V+   MGV+    L  Y  + F +++
Sbjct: 134 NVSVQFFVYVILYILATVFLAYVWICEMGVV---TLQAYTLHLFCVLY 178


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 538 INSKSRFFLTILMKLLNIYFI 600
           ++ K   F+  L+K LNI+FI
Sbjct: 7   LSLKDIVFINPLVKYLNIFFI 27


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 309 LSRYCSMPLTFLS 271
           L RYCS+ L FL+
Sbjct: 73  LQRYCSVLLVFLT 85


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 309 LSRYCSMPLTFLS 271
           L RYCS+ L FL+
Sbjct: 69  LQRYCSVLLVFLT 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,055
Number of Sequences: 336
Number of extensions: 3156
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)