Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0374
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-P...   182   3e-46
AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-P...   182   3e-46
U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog pro...   181   1e-45
AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p pro...   181   1e-45
BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p pro...   168   5e-42
AE014298-1446|AAF46580.1|  351|Drosophila melanogaster CG2898-PA...    32   0.86 
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   8.0  

>AE014296-3758|AAF45440.2|  231|Drosophila melanogaster CG17521-PA,
           isoform A protein.
          Length = 231

 Score =  182 bits (444), Expect = 3e-46
 Identities = 79/83 (95%), Positives = 82/83 (98%)
 Frame = +1

Query: 7   EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQ 186
           EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQ
Sbjct: 13  EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQ 72

Query: 187 LSSEALEAGRICCNKYLVKNCGK 255
           LSSEALEAGRICCNKYLVK CGK
Sbjct: 73  LSSEALEAGRICCNKYLVKYCGK 95



 Score =  181 bits (440), Expect = 1e-45
 Identities = 85/88 (96%), Positives = 87/88 (98%)
 Frame = +3

Query: 252 KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS 431
           KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS
Sbjct: 95  KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS 154

Query: 432 DRWKAQVIEALRRAKFKFPGRQKIYVQR 515
           DR+KAQVIEALRRAKFKFPGRQKIYV +
Sbjct: 155 DRYKAQVIEALRRAKFKFPGRQKIYVSK 182



 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +2

Query: 485 PRTSKDLRSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGP 622
           P   K   SKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHGP
Sbjct: 173 PGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGP 218


>AE014296-3757|AAG22453.3|  237|Drosophila melanogaster CG17521-PB,
           isoform B protein.
          Length = 237

 Score =  182 bits (444), Expect = 3e-46
 Identities = 79/83 (95%), Positives = 82/83 (98%)
 Frame = +1

Query: 7   EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQ 186
           EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQ
Sbjct: 19  EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQ 78

Query: 187 LSSEALEAGRICCNKYLVKNCGK 255
           LSSEALEAGRICCNKYLVK CGK
Sbjct: 79  LSSEALEAGRICCNKYLVKYCGK 101



 Score =  181 bits (440), Expect = 1e-45
 Identities = 85/88 (96%), Positives = 87/88 (98%)
 Frame = +3

Query: 252 KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS 431
           KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS
Sbjct: 101 KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS 160

Query: 432 DRWKAQVIEALRRAKFKFPGRQKIYVQR 515
           DR+KAQVIEALRRAKFKFPGRQKIYV +
Sbjct: 161 DRYKAQVIEALRRAKFKFPGRQKIYVSK 188



 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +2

Query: 485 PRTSKDLRSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGP 622
           P   K   SKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHGP
Sbjct: 179 PGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGP 224


>U49721-1|AAC16108.1|  218|Drosophila melanogaster QM homolog
           protein.
          Length = 218

 Score =  181 bits (440), Expect = 1e-45
 Identities = 85/88 (96%), Positives = 87/88 (98%)
 Frame = +3

Query: 252 KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS 431
           KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS
Sbjct: 82  KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS 141

Query: 432 DRWKAQVIEALRRAKFKFPGRQKIYVQR 515
           DR+KAQVIEALRRAKFKFPGRQKIYV +
Sbjct: 142 DRYKAQVIEALRRAKFKFPGRQKIYVSK 169



 Score =  180 bits (439), Expect = 1e-45
 Identities = 78/82 (95%), Positives = 81/82 (98%)
 Frame = +1

Query: 10  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 189
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 190 SSEALEAGRICCNKYLVKNCGK 255
           SSEALEAGRICCNKYLVK CGK
Sbjct: 61  SSEALEAGRICCNKYLVKYCGK 82



 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +2

Query: 485 PRTSKDLRSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGP 622
           P   K   SKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHGP
Sbjct: 160 PGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGP 205


>AY070910-1|AAL48532.1|  218|Drosophila melanogaster RE02339p
           protein.
          Length = 218

 Score =  181 bits (440), Expect = 1e-45
 Identities = 85/88 (96%), Positives = 87/88 (98%)
 Frame = +3

Query: 252 KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS 431
           KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS
Sbjct: 82  KDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSS 141

Query: 432 DRWKAQVIEALRRAKFKFPGRQKIYVQR 515
           DR+KAQVIEALRRAKFKFPGRQKIYV +
Sbjct: 142 DRYKAQVIEALRRAKFKFPGRQKIYVSK 169



 Score =  180 bits (439), Expect = 1e-45
 Identities = 78/82 (95%), Positives = 81/82 (98%)
 Frame = +1

Query: 10  MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 189
           MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQL
Sbjct: 1   MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60

Query: 190 SSEALEAGRICCNKYLVKNCGK 255
           SSEALEAGRICCNKYLVK CGK
Sbjct: 61  SSEALEAGRICCNKYLVKYCGK 82



 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +2

Query: 485 PRTSKDLRSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGP 622
           P   K   SKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHGP
Sbjct: 160 PGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGP 205


>BT003580-1|AAO39584.1|  197|Drosophila melanogaster LD24589p
           protein.
          Length = 197

 Score =  168 bits (409), Expect = 5e-42
 Identities = 73/77 (94%), Positives = 76/77 (98%)
 Frame = +1

Query: 7   EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQ 186
           EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLG+K+ATV+DFPLCVHLVSDEYEQ
Sbjct: 6   EMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQ 65

Query: 187 LSSEALEAGRICCNKYL 237
           LSSEALEAGRICCNK L
Sbjct: 66  LSSEALEAGRICCNKML 82



 Score =  141 bits (341), Expect = 9e-34
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 306 NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKF 485
           NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDR+KAQVIEALRRAKFKF
Sbjct: 79  NKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKF 138

Query: 486 PGRQKIYVQR 515
           PGRQKIYV +
Sbjct: 139 PGRQKIYVSK 148



 Score = 70.1 bits (164), Expect = 3e-12
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +2

Query: 485 PRTSKDLRSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGP 622
           P   K   SKKWGFTKYER+ +E+LR++ RL  DGC V+YRPEHGP
Sbjct: 139 PGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGP 184


>AE014298-1446|AAF46580.1|  351|Drosophila melanogaster CG2898-PA
           protein.
          Length = 351

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 26/75 (34%), Positives = 41/75 (54%)
 Frame = -1

Query: 229 YCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVY 50
           YC+R V  P+ +SS +    TP  R+  +  R  S   N++  SW  V+  R+SI+++  
Sbjct: 264 YCTRRVPEPEDVSSRIETI-TPIVRSTATSLRRSS---NKK--SWMPVN--RSSINNSEK 315

Query: 49  FCSTGSISLAGAPSR 5
               GS +LAG+P R
Sbjct: 316 GSRRGSRNLAGSPKR 330


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = -1

Query: 208 PPKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRYGSWDQVHPDRTS 68
           PPK  S+    +RTP+         + S+   R   SWD V+  R S
Sbjct: 544 PPKKESAQSAAKRTPADSVFTKATANTSARKPRASDSWDYVYKQRAS 590


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,795,690
Number of Sequences: 53049
Number of extensions: 791029
Number of successful extensions: 2329
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2328
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)