Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0373
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.45 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.45 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.79 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.7  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -3

Query: 266 SLNYAFKIQFYKTKEILNLI*NLHLCDIIRLFTFIYTSIKYI 141
           S++  FKI FY T   +NL+  + + D+I L   ++T +  I
Sbjct: 40  SVSTFFKIPFYSTLRPINLLVQI-ILDVILLILNVHTILTTI 80


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -3

Query: 266 SLNYAFKIQFYKTKEILNLI*NLHLCDIIRLFTFIYTSIKYI 141
           S++  FKI FY T   +NL+  + + D+I L   ++T +  I
Sbjct: 40  SVSTFFKIPFYSTLRPINLLVQI-ILDVILLILNVHTILTTI 80


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 251 FKIQFYKTKEILNLI*NLHLCDIIRLFTFIYTSIKYI 141
           FKI FY T   +NL+  + + D+I L   ++T +  I
Sbjct: 365 FKIPFYSTLRPINLLVQI-ILDVILLILNVHTILTTI 400


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 334  TRSGTWWSNVTS 299
            T+  TWWS+ T+
Sbjct: 1037 TKPSTWWSSTTT 1048


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 120 CATCGN*MHTSLF 82
           C  CGN + TSLF
Sbjct: 637 CEKCGNKIDTSLF 649


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 668 WRRVCTFFI 642
           WR VCTF +
Sbjct: 166 WREVCTFVV 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,448
Number of Sequences: 336
Number of extensions: 3290
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)