Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0372
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.7  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   9.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 400 YKYIVETLRTQIYKRKTITVICFEII 477
           + +IV T     YK   I  I FE+I
Sbjct: 62  FMHIVPTKLISFYKSTAILEIAFEVI 87


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 301 CPHN*QVERIAQFSLTELAPGGRVCSEPAL 390
           C +   V+ + +   T LA    +CSEPA+
Sbjct: 48  CENQKCVKYLVEDEETSLATCNMLCSEPAI 77


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 449 VFLLYIWVLKVSTIYL 402
           VFL Y+W+ ++  + L
Sbjct: 151 VFLAYVWICEMGVVTL 166


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 449 VFLLYIWVLKVSTIYL 402
           VFL Y+W+ ++  + L
Sbjct: 151 VFLAYVWICEMGVVTL 166


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 316 QVERIAQFSLTELAPGGRVCSEPALSQ 396
           Q  R+A   + +LA GGR    PA S+
Sbjct: 312 QQRRVAAVQVPQLAGGGRRGPGPARSR 338


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 167 ERSPARKGTRYQRDRCSPRKY*LQCLM 247
           ++SP  K  R +RD   P+ Y  Q L+
Sbjct: 207 KKSPPEKHLRLRRDTAPPQWYQHQPLL 233


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = +3

Query: 318 SRKNCTVLINRTGPWWQSVQRACTQSGI 401
           SRK    LI+    WW  ++    + G+
Sbjct: 86  SRKIIHYLIDNKRDWWNELEAKYDKDGV 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,485
Number of Sequences: 336
Number of extensions: 2452
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)