Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0371
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p pro...    29   4.6  
BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p pro...    29   4.6  
AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA...    29   4.6  
AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p pro...    29   8.0  
AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA...    29   8.0  
AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB...    29   8.0  

>BT023382-1|AAY55798.1|  265|Drosophila melanogaster IP10372p
           protein.
          Length = 265

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 381 YNLKRII*TLYYYLKVCAN*RITIFQSHFWLLPKNKNF 268
           YNL R I  +Y  +++  N  + IF  HF L P N NF
Sbjct: 53  YNLDRAI-KIYNIVQIAYNVILLIFSVHFMLGPGNYNF 89


>BT023334-1|AAY55750.1|  265|Drosophila melanogaster IP10172p
           protein.
          Length = 265

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 381 YNLKRII*TLYYYLKVCAN*RITIFQSHFWLLPKNKNF 268
           YNL R I  +Y  +++  N  + IF  HF L P N NF
Sbjct: 53  YNLDRAI-KIYNIVQIAYNVILLIFSVHFMLGPGNYNF 89


>AE014297-1054|AAF54463.2|  265|Drosophila melanogaster CG9459-PA
           protein.
          Length = 265

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 381 YNLKRII*TLYYYLKVCAN*RITIFQSHFWLLPKNKNF 268
           YNL R I  +Y  +++  N  + IF  HF L P N NF
Sbjct: 53  YNLDRAI-KIYNIVQIAYNVILLIFSVHFMLGPGNYNF 89


>AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p
           protein.
          Length = 1602

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 498 PLQLKLRYEAPIHRKTVKTIATFYQCLKKKKKQITPFID*KENYANRNTI 647
           PL+  L    P+ +K VKT+A         K  I  F   K+N AN + I
Sbjct: 216 PLEKLLESGKPLDKKAVKTVAELTAMKSLTKNSIVSFEVFKKNMANLSDI 265


>AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA,
           isoform A protein.
          Length = 1877

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 498 PLQLKLRYEAPIHRKTVKTIATFYQCLKKKKKQITPFID*KENYANRNTI 647
           PL+  L    P+ +K VKT+A         K  I  F   K+N AN + I
Sbjct: 216 PLEKLLESGKPLDKKAVKTVAELTAMKSLTKNSIVSFEVFKKNMANLSDI 265


>AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB,
           isoform B protein.
          Length = 1693

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 498 PLQLKLRYEAPIHRKTVKTIATFYQCLKKKKKQITPFID*KENYANRNTI 647
           PL+  L    P+ +K VKT+A         K  I  F   K+N AN + I
Sbjct: 216 PLEKLLESGKPLDKKAVKTVAELTAMKSLTKNSIVSFEVFKKNMANLSDI 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,479,623
Number of Sequences: 53049
Number of extensions: 531127
Number of successful extensions: 803
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)