Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0370
(699 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 197 2e-49
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 142 7e-33
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 134 3e-30
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 133 3e-30
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 133 5e-30
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 132 8e-30
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 128 1e-28
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 128 1e-28
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 128 2e-28
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 127 3e-28
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 126 4e-28
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 122 6e-27
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 119 8e-26
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 116 6e-25
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 116 7e-25
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 115 1e-24
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 112 7e-24
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 112 9e-24
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 111 1e-23
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 111 2e-23
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 109 8e-23
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 106 5e-22
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 103 4e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 103 6e-21
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 103 6e-21
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 102 7e-21
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 101 1e-20
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 98 2e-19
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 97 3e-19
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 94 3e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 92 1e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 92 1e-17
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 90 4e-17
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 89 7e-17
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 89 1e-16
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 87 4e-16
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 87 5e-16
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 85 2e-15
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 82 1e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 82 1e-14
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 79 8e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 79 8e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 79 1e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 79 1e-13
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 78 2e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 77 3e-13
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 77 6e-13
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 76 7e-13
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 76 7e-13
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 76 7e-13
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 75 2e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 75 2e-12
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 75 2e-12
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 74 3e-12
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 74 3e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 74 3e-12
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 74 4e-12
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 73 5e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 73 9e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 73 9e-12
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 72 2e-11
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 71 2e-11
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 71 3e-11
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 71 3e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 70 5e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 8e-11
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 69 1e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 68 2e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 68 3e-10
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 67 3e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 67 3e-10
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 66 6e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 66 6e-10
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 66 8e-10
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 66 8e-10
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 1e-09
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 65 2e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 2e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 64 2e-09
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 64 4e-09
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 63 6e-09
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 63 6e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 63 7e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 62 1e-08
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 62 1e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 62 2e-08
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 62 2e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 60 4e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 1e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 59 1e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 56 1e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 52 2e-05
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 52 2e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 2e-05
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 51 3e-05
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 51 3e-05
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 48 2e-04
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 46 0.001
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 45 0.002
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 45 0.002
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 45 0.002
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 43 0.008
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 40 0.078
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 38 0.31
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.3
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.2
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.2
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 34 3.9
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.9
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 33 8.9
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 197 bits (480), Expect = 2e-49
Identities = 96/144 (66%), Positives = 104/144 (72%)
Frame = +3
Query: 36 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 215
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 216 NLCYTSNWVIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 395
NLCY SNW+I IY + YFTSAT+IIAVPTGIKIF LAT HGTQIN
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQIN 126
Query: 396 YNPNIL*RLGFVFLFTVGGLTGVI 467
Y+P+IL LGFVFLFTVGGLTGVI
Sbjct: 127 YSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 142 bits (344), Expect = 7e-33
Identities = 67/83 (80%), Positives = 74/83 (89%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+FTVG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLF
Sbjct: 202 AHHMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLF 261
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
TVGGLTGV+LANSSIDI LHDTY
Sbjct: 262 TVGGLTGVVLANSSIDIVLHDTY 284
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 673
VVAHFHYVLS +PLFTG++LN++ LKIQF +FIGVN+TFF
Sbjct: 286 VVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFLKIQFIIMFIGVNLTFF 339
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1
Query: 121 EVYILILPGFGIISHIISQERGKKETF 201
EVYILILPGFG+ISHIISQE GKKE F
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAF 181
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 134 bits (323), Expect = 3e-30
Identities = 57/83 (68%), Positives = 74/83 (89%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLF
Sbjct: 289 AHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLF 348
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
TVGGLTG++LANSS+DI LHDTY
Sbjct: 349 TVGGLTGIVLANSSLDIVLHDTY 371
Score = 119 bits (287), Expect = 6e-26
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 192
IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKK
Sbjct: 206 ITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKK 265
Query: 193 ETF 201
E F
Sbjct: 266 EPF 268
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS + +PLF+G +L+ KI F +FIGVN+TFFPQHFLG
Sbjct: 373 VVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLG 432
Query: 692 LA 697
L+
Sbjct: 433 LS 434
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 133 bits (322), Expect = 3e-30
Identities = 59/83 (71%), Positives = 73/83 (87%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLF
Sbjct: 54 AHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLF 113
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
TVGGLTG+ILANSS+DI LHDTY
Sbjct: 114 TVGGLTGIILANSSLDIVLHDTY 136
Score = 59.3 bits (137), Expect = 9e-08
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 106 FFGHPEVYILILPGFGIISHIISQERGKKETF 201
FFGHPEVYILILPGFG+ISHI++ GKKE F
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPF 33
Score = 38.3 bits (85), Expect = 0.18
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFI 652
VVAHFHYVLS + +PLF+G +L++ KI F +F+
Sbjct: 138 VVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWTKIHFGVMFM 184
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 133 bits (321), Expect = 5e-30
Identities = 59/83 (71%), Positives = 72/83 (86%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLF
Sbjct: 289 AHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLF 348
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
TVGGLTG++LANSSIDI LHDTY
Sbjct: 349 TVGGLTGIVLANSSIDIVLHDTY 371
Score = 119 bits (286), Expect = 8e-26
Identities = 52/63 (82%), Positives = 58/63 (92%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 192
IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKK
Sbjct: 206 ITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKK 265
Query: 193 ETF 201
E F
Sbjct: 266 EPF 268
Score = 72.5 bits (170), Expect = 9e-12
Identities = 35/62 (56%), Positives = 41/62 (66%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS + +PLFTG +L+ KI F +FIGVN+TFFPQHFLG
Sbjct: 373 VVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTWTKIHFGVMFIGVNLTFFPQHFLG 432
Query: 692 LA 697
LA
Sbjct: 433 LA 434
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 132 bits (319), Expect = 8e-30
Identities = 58/83 (69%), Positives = 72/83 (86%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLF
Sbjct: 289 AHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLF 348
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
TVGGLTG++LANSS+DI LHDTY
Sbjct: 349 TVGGLTGIVLANSSLDIVLHDTY 371
Score = 120 bits (289), Expect = 3e-26
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 192
IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++ GKK
Sbjct: 206 ITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYAGKK 265
Query: 193 ETF 201
E F
Sbjct: 266 EPF 268
Score = 76.6 bits (180), Expect = 6e-13
Identities = 37/62 (59%), Positives = 42/62 (67%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS + +PLFTG +LNS KI F +FIGVN+TFFPQHFLG
Sbjct: 373 VVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHFGVMFIGVNLTFFPQHFLG 432
Query: 692 LA 697
LA
Sbjct: 433 LA 434
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 128 bits (310), Expect = 1e-28
Identities = 61/113 (53%), Positives = 79/113 (69%)
Frame = +3
Query: 171 FTRKRKKRNFWLFRNNLCYTSNWVIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGI 350
F KK F + + + V AHH+FT+G+D+DTRAYFTSAT+IIA+PTGI
Sbjct: 243 FNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGI 302
Query: 351 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 509
KIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+NSS+D+ LHDTY
Sbjct: 303 KIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSNSSVDVVLHDTY 355
Score = 125 bits (301), Expect = 1e-27
Identities = 56/64 (87%), Positives = 60/64 (93%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
AIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E GK
Sbjct: 189 AITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNESGK 248
Query: 190 KETF 201
KETF
Sbjct: 249 KETF 252
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/61 (54%), Positives = 39/61 (63%)
Frame = +2
Query: 515 VAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGL 694
VAHFHYVLS +P+F GL +N Y LKI F+ FIGVN+ FFPQHFLGL
Sbjct: 358 VAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKIHFYLTFIGVNLIFFPQHFLGL 417
Query: 695 A 697
+
Sbjct: 418 S 418
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 128 bits (309), Expect = 1e-28
Identities = 57/90 (63%), Positives = 74/90 (82%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + +
Sbjct: 259 VLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWA 318
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
LGFVFLFT+GGLTG++LANSSID+ LHDTY
Sbjct: 319 LGFVFLFTLGGLTGIVLANSSIDVVLHDTY 348
Score = 95.1 bits (226), Expect = 1e-18
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = +1
Query: 37 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 201
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPF 245
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 128 bits (308), Expect = 2e-28
Identities = 58/90 (64%), Positives = 73/90 (81%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L
Sbjct: 284 VLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFA 343
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
+GF+FLFT+GGLTG++LANS +DI LHDTY
Sbjct: 344 VGFIFLFTIGGLTGIVLANSGLDIALHDTY 373
Score = 115 bits (277), Expect = 1e-24
Identities = 52/60 (86%), Positives = 55/60 (91%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
AIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S GK
Sbjct: 208 AITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSGK 267
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/62 (41%), Positives = 32/62 (51%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS G + + +I F+ F GVN+TFFP HFLG
Sbjct: 375 VVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLG 434
Query: 692 LA 697
L+
Sbjct: 435 LS 436
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 127 bits (306), Expect = 3e-28
Identities = 55/90 (61%), Positives = 76/90 (84%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
++ V +HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L
Sbjct: 282 ILGFVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFA 341
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
LGFVF+FT+GGL+GV+LAN+S+DI HDTY
Sbjct: 342 LGFVFMFTIGGLSGVVLANASLDIAFHDTY 371
Score = 101 bits (241), Expect = 2e-20
Identities = 46/59 (77%), Positives = 50/59 (84%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 207 ITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTISANSNK 265
Score = 60.1 bits (139), Expect = 5e-08
Identities = 30/61 (49%), Positives = 33/61 (54%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS P GL N K F+ +F GVN+TFFPQHFLG
Sbjct: 373 VVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAHFWVLFTGVNLTFFPQHFLG 432
Query: 692 L 694
L
Sbjct: 433 L 433
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 126 bits (305), Expect = 4e-28
Identities = 59/75 (78%), Positives = 68/75 (90%)
Frame = +3
Query: 285 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 464
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 465 ILANSSIDITLHDTY 509
+LANSS+DI LHDTY
Sbjct: 61 VLANSSLDIVLHDTY 75
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +1
Query: 556 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFS 696
C Y IY L+ FI K L KNSIF NI+ K+NIF TF S
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSIS 138
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 122 bits (295), Expect = 6e-27
Identities = 56/90 (62%), Positives = 73/90 (81%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V AHH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L
Sbjct: 289 VLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFA 348
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
+GF+FLFT+GGLTG++LANS +DI+LHDTY
Sbjct: 349 IGFIFLFTIGGLTGIVLANSGLDISLHDTY 378
Score = 108 bits (260), Expect = 1e-22
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
AIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S
Sbjct: 213 AITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS 267
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS + TGL + +I F++ FIGVN+TF P HFLG
Sbjct: 380 VVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETLGQIHFWSTFIGVNLTFMPMHFLG 439
Query: 692 LA 697
LA
Sbjct: 440 LA 441
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 119 bits (286), Expect = 8e-26
Identities = 52/63 (82%), Positives = 58/63 (92%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 192
IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKK
Sbjct: 207 ITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKK 266
Query: 193 ETF 201
E F
Sbjct: 267 EPF 269
Score = 76.2 bits (179), Expect = 7e-13
Identities = 33/48 (68%), Positives = 41/48 (85%)
Frame = +3
Query: 366 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 509
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTY
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTY 372
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/62 (56%), Positives = 40/62 (64%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS + +PLFTG +LNS K F +F GVN+TFFPQHFLG
Sbjct: 374 VVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLG 433
Query: 692 LA 697
LA
Sbjct: 434 LA 435
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 116 bits (279), Expect = 6e-25
Identities = 59/106 (55%), Positives = 76/106 (71%), Gaps = 2/106 (1%)
Frame = +3
Query: 198 FWLFRNNLCYTSNWVIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 377
FW F L V+ V A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+
Sbjct: 236 FWFFGAMLAIG---VLGFIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATV 292
Query: 378 HGTQIN--YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 509
G+ N + + LGF+FLFT+GGLTG++L+NSS+DI LHDTY
Sbjct: 293 SGSGRNLIFTTPMAWALGFIFLFTIGGLTGIVLSNSSLDILLHDTY 338
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 114
AIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 206 AITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/62 (48%), Positives = 35/62 (56%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS + TG + I F+ +F+GVNITFFPQHFLG
Sbjct: 340 VVAHFHYVLSMGAVFAIFGGFYLWFGKITGYAYKDIYGLIHFWLMFLGVNITFFPQHFLG 399
Query: 692 LA 697
LA
Sbjct: 400 LA 401
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 116 bits (278), Expect = 7e-25
Identities = 52/88 (59%), Positives = 70/88 (79%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
++ V +HH++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L
Sbjct: 281 ILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFA 340
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHD 503
LGF+ LFT+GGLTGVILAN+S+D+ LHD
Sbjct: 341 LGFIALFTIGGLTGVILANASLDVALHD 368
Score = 113 bits (271), Expect = 5e-24
Identities = 49/60 (81%), Positives = 55/60 (91%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
AIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S GK
Sbjct: 205 AITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSGK 264
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 115 bits (276), Expect = 1e-24
Identities = 49/83 (59%), Positives = 69/83 (83%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
+HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +F
Sbjct: 315 SHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMF 374
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
T+GGL+GV+LAN+S +I HDTY
Sbjct: 375 TIGGLSGVVLANASENIAFHDTY 397
Score = 102 bits (244), Expect = 1e-20
Identities = 47/60 (78%), Positives = 52/60 (86%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS K
Sbjct: 232 AITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVISANSNK 291
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/61 (52%), Positives = 37/61 (60%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS P GLS ++ KI F+ +FIGVN+TFFPQHFLG
Sbjct: 399 VVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKASKIHFWILFIGVNLTFFPQHFLG 458
Query: 692 L 694
L
Sbjct: 459 L 459
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 112 bits (270), Expect = 7e-24
Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 16/111 (14%)
Frame = +3
Query: 225 YTSNWVIRIYV*A--HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 398
Y WV R Y+ HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I
Sbjct: 334 YNFVWVNRKYLLTILHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKM 393
Query: 399 NPNIL*RLGFVFLFTVGGL--------------TGVILANSSIDITLHDTY 509
P +L LGFVFLFT+GGL +GV+LAN+S+DI HDTY
Sbjct: 394 TPVMLFSLGFVFLFTIGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTY 444
Score = 99 bits (238), Expect = 5e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/77 (37%), Positives = 37/77 (48%)
Frame = +2
Query: 464 NFSQFFXXXXXXXXXXVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFT 643
N+ F + HFHYVLS P G + + + K+QF+
Sbjct: 464 NYKDFLATDYMLETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWL 523
Query: 644 IFIGVNITFFPQHFLGL 694
+FIGVN TFFPQHFLGL
Sbjct: 524 LFIGVNATFFPQHFLGL 540
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 112 bits (269), Expect = 9e-24
Identities = 48/83 (57%), Positives = 67/83 (80%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
+HH+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LF
Sbjct: 306 SHHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLF 365
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
T+GG+TGV++ANSS+DI HDTY
Sbjct: 366 TIGGVTGVVIANSSLDIMFHDTY 388
Score = 89.4 bits (212), Expect = 7e-17
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 192
+T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK
Sbjct: 224 LTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKK 282
Query: 193 ETF 201
F
Sbjct: 283 PIF 285
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 111 bits (268), Expect = 1e-23
Identities = 50/90 (55%), Positives = 68/90 (75%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++
Sbjct: 324 VVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWA 383
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
LGF+FLFTVGG+TGV+LAN +D LHDTY
Sbjct: 384 LGFIFLFTVGGVTGVVLANGGVDDVLHDTY 413
Score = 99.5 bits (237), Expect = 7e-20
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S
Sbjct: 248 AITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS 302
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS +P +G N ++ ++ F+ F GVN+ FFP HFLG
Sbjct: 415 VVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNEFLGQLHFWVFFAGVNLLFFPMHFLG 474
Query: 692 LA 697
L+
Sbjct: 475 LS 476
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 111 bits (266), Expect = 2e-23
Identities = 50/81 (61%), Positives = 65/81 (80%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
+HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLF
Sbjct: 289 SHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLF 348
Query: 441 TVGGLTGVILANSSIDITLHD 503
TVGGLTGV+LAN+S+D+ HD
Sbjct: 349 TVGGLTGVVLANASLDVAFHD 369
Score = 100 bits (240), Expect = 3e-20
Identities = 46/63 (73%), Positives = 51/63 (80%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 192
IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S KK
Sbjct: 207 ITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TYSKK 265
Query: 193 ETF 201
F
Sbjct: 266 PVF 268
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 109 bits (261), Expect = 8e-23
Identities = 51/77 (66%), Positives = 62/77 (80%)
Frame = +3
Query: 279 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 458
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 459 GVILANSSIDITLHDTY 509
G++LANSS+DI LHDTY
Sbjct: 356 GIVLANSSLDIALHDTY 372
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS + +PLFTG +LN+ K F +F GVN+TFFPQHFLG
Sbjct: 374 VVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHFGVMFTGVNLTFFPQHFLG 433
Query: 692 LA 697
LA
Sbjct: 434 LA 435
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 106 bits (255), Expect = 5e-22
Identities = 69/137 (50%), Positives = 79/137 (57%), Gaps = 4/137 (2%)
Frame = +3
Query: 288 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 467
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGGPN--- 57
Query: 468 LANSSIDITLHDT----YM**LIFIMFXXXXXXXXXXXXXXXXXXXXXAFH*ILIY*KFN 635
+N S+ I + + M LIFIMF F + KFN
Sbjct: 58 WSNFSLFINWYCSSRYHIMLLLIFIMFFQLGLYLLLYQDSFIDTHYLQDFLLMQNDLKFN 117
Query: 636 FLQYLLE*I*HFFHNIF 686
Y LE I HF HNIF
Sbjct: 118 LQLYFLELILHFSHNIF 134
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 103 bits (247), Expect = 4e-21
Identities = 47/64 (73%), Positives = 53/64 (82%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+ K
Sbjct: 209 AITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TFSK 267
Query: 190 KETF 201
K F
Sbjct: 268 KRVF 271
Score = 101 bits (243), Expect = 1e-20
Identities = 48/91 (52%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL* 416
+I V AHH++T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P
Sbjct: 285 LIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF- 343
Query: 417 RLGFVFLFTVGGLTGVILANSSIDITLHDTY 509
GFV LFT+GG+TG+IL+N+ ID ++HDT+
Sbjct: 344 AAGFVVLFTIGGITGIILSNAGIDTSIHDTH 374
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/60 (45%), Positives = 32/60 (53%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VV HFHYVLS + TGLS + + + F+ FIGVN TFFP HFLG
Sbjct: 376 VVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLSYSESLGQAHFWMTFIGVNFTFFPMHFLG 435
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 103 bits (246), Expect = 6e-21
Identities = 43/55 (78%), Positives = 51/55 (92%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
AIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++
Sbjct: 311 AITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA 365
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/83 (50%), Positives = 61/83 (73%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLF
Sbjct: 394 AHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLF 453
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
T+GG TG+IL+ + +D HDTY
Sbjct: 454 TLGGTTGIILSQAGVDRAYHDTY 476
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYV+S +G + ++ F+ FIG NITFFPQHFLG
Sbjct: 478 VVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPEWAGQVHFWVFFIGTNITFFPQHFLG 537
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 103 bits (246), Expect = 6e-21
Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG---TQINYNPNIL*RLGFVF 434
HH+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + + +P+ +G V
Sbjct: 293 HHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVL 352
Query: 435 LFTVGGLTGVILANSSIDITLHDTY 509
LFT+GGLTGVILAN+++ LHD+Y
Sbjct: 353 LFTIGGLTGVILANAALSTLLHDSY 377
Score = 95.5 bits (227), Expect = 1e-18
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 192
+T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ + K
Sbjct: 209 LTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSAKL 268
Query: 193 ETF 201
F
Sbjct: 269 HVF 271
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS +P +TG+ ++ F FIGVN TFFP H++G
Sbjct: 379 VVAHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPRKDLVLTHFMLTFIGVNFTFFPMHWMG 438
Query: 692 L 694
L
Sbjct: 439 L 439
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 102 bits (245), Expect = 7e-21
Identities = 48/102 (47%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Frame = +3
Query: 210 RNNLCYTSNW--VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 383
+ ++ + S W V+ V HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G
Sbjct: 280 QTSMTFASIWIAVLGTSVWGHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFG 339
Query: 384 TQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 509
+ P F+FLFTVGGL+G+IL+ +S+DI LHDTY
Sbjct: 340 SNQKMQPLWCWTYSFIFLFTVGGLSGIILSAASLDIILHDTY 381
Score = 83.0 bits (196), Expect = 6e-15
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS +
Sbjct: 215 SLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAV 268
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHY LS P G+S +S ++ F F+G N+TFFP HF G
Sbjct: 383 VVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDSVMMMAVFVCFFVGTNMTFFPMHFAG 442
Query: 692 L 694
L
Sbjct: 443 L 443
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 101 bits (243), Expect = 1e-20
Identities = 46/63 (73%), Positives = 53/63 (84%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 192
IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S KK
Sbjct: 207 ITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TYSKK 265
Query: 193 ETF 201
F
Sbjct: 266 PVF 268
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 407
+HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 289 SHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 98.3 bits (234), Expect = 2e-19
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 168
IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 296 ITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
Score = 82.6 bits (195), Expect = 8e-15
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLF 440
HH+F VG D T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLF
Sbjct: 380 HHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLF 439
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
TVGG+TGV L+ S++DI HDT+
Sbjct: 440 TVGGVTGVALSASALDILFHDTW 462
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/61 (40%), Positives = 33/61 (54%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS +P G SLN Y+L+ + +G N+ FFP H+LG
Sbjct: 464 VVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLNKYLLQGHWLLSMVGFNLCFFPMHYLG 523
Query: 692 L 694
+
Sbjct: 524 I 524
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 97.5 bits (232), Expect = 3e-19
Identities = 59/148 (39%), Positives = 69/148 (46%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
AIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++ + ++ K
Sbjct: 202 AITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDLVSFHMLFPKKVEK 261
Query: 190 KETFXXXXXXXXXXXXXXXXFMFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFLDD* 369
+ +FE KFL D
Sbjct: 262 SKLLVVSVSFMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQLSLLLSQLGLKFLVDW 321
Query: 370 LQYMELKLIITLIFYED*VLYFYSQ*ED 453
+MELKLI+ L FYED L FY Q ED
Sbjct: 322 QPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 93.9 bits (223), Expect = 3e-18
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Frame = +3
Query: 219 LCYTSNWVIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQIN 395
L S +I V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++
Sbjct: 258 LAMASIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMT 317
Query: 396 YNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 509
N ++ F+ F +GG +G+IL+N+S+D LHDTY
Sbjct: 318 LNSLTFLQVSFIVSFAIGGTSGIILSNASVDHYLHDTY 355
Score = 81.0 bits (191), Expect = 3e-14
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 190 ITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN-YNPNIL* 416
V+ V HH++T G+++DTRAYFTS TI+I++PTG K+F + T + + + L
Sbjct: 287 VLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLL 346
Query: 417 RLGFVFLFTVGGLTGVILANSSIDITLHDTY 509
L F+ FT GG TGVIL N++ID+ LHDTY
Sbjct: 347 SLLFICTFTFGGTTGVILGNAAIDVALHDTY 377
Score = 90.6 bits (215), Expect = 3e-17
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
+ +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 212 VLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 38.3 bits (85), Expect = 0.18
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF-IGVNITFFPQHFL 688
V+AHFH+VLS F G +L + I + +F +GV +TF P HFL
Sbjct: 379 VIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLRENSIVILWSMLFFVGVILTFLPMHFL 438
Query: 689 G 691
G
Sbjct: 439 G 439
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 91.9 bits (218), Expect = 1e-17
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 138
AIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 178 AITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 90.2 bits (214), Expect = 4e-17
Identities = 39/90 (43%), Positives = 64/90 (71%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ +V AHH+FTVG+D+DTR YF+SAT++IA+PT IK+F + + + +
Sbjct: 39 VVGYFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-V 97
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
+ F+ +F +GG+TG++LANS +D+ +HD+Y
Sbjct: 98 VAFLLMFLLGGVTGLVLANSEVDLVMHDSY 127
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVLS + + L +G +++L++Q + G F+ H G
Sbjct: 129 VVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWLLRVQVVLLVWGTTCIFWGMHLSG 188
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 89.4 bits (212), Expect = 7e-17
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 192
+T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q KK
Sbjct: 224 LTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVYAKK 282
Query: 193 ETF 201
F
Sbjct: 283 PIF 285
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 88.6 bits (210), Expect = 1e-16
Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT-QINYNPNIL*RLGFVFL 437
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 438 FTVGGLTGVILANSSIDITLHDTY 509
FT+GG TGV++ N+ +DI LHDTY
Sbjct: 62 FTLGGTTGVVMGNAGMDIALHDTY 85
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 87.0 bits (206), Expect = 4e-16
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = +3
Query: 222 CYTSNWVIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINY 398
C S V+ +V AHH+FTVG+DID+R+YF+ AT II++PT +K+F + T G
Sbjct: 285 CIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRG 344
Query: 399 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTY 509
N + F+ F GG TG++L++ S+DI LHDTY
Sbjct: 345 NNSSWSFFSFLICFCFGGFTGLLLSSGSLDIMLHDTY 381
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 86.6 bits (205), Expect = 5e-16
Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 270 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 443
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 444 VGGLTGVILANSSIDITLHDTY 509
GG TGVIL N +ID+ LHDTY
Sbjct: 60 FGGTTGVILGNGAIDVALHDTY 81
Score = 39.1 bits (87), Expect = 0.10
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN-SYILKIQFFTIFIGVNITFFPQHFL 688
V+AHFH+VLS F G +L + I+ + F+GV +TF P HFL
Sbjct: 83 VIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENTIIVLWSILFFVGVVLTFLPMHFL 142
Query: 689 G 691
G
Sbjct: 143 G 143
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 85.0 bits (201), Expect = 2e-15
Identities = 35/53 (66%), Positives = 45/53 (84%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
+T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+
Sbjct: 209 VTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
Score = 83.4 bits (197), Expect = 5e-15
Identities = 36/90 (40%), Positives = 60/90 (66%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
++ ++V AHH+F VG+D+D+RAYF +I+I +PT +K+F + + T + +
Sbjct: 284 ILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFV 343
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
+ F+F+F +G +TG+ L+N IDI LHDTY
Sbjct: 344 IMFIFMFLIGAVTGLFLSNVGIDIMLHDTY 373
Score = 39.5 bits (88), Expect = 0.078
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF--TIFIGVNITFFPQHF 685
VV HFHYVLS + L L + Y+ + +F T+FIG N+ FFP H
Sbjct: 375 VVGHFHYVLSLGAVVGFFTGFI--HFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHS 432
Query: 686 LGL 694
LG+
Sbjct: 433 LGM 435
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +1
Query: 19 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S
Sbjct: 214 MVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 306 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSS 482
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 483 IDITLHDT 506
ID+ LHDT
Sbjct: 369 IDLALHDT 376
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/87 (47%), Positives = 56/87 (64%)
Frame = +3
Query: 249 IYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGF 428
+ V AHH+FT G R +F + T++IAVPTGIKIF T+ G +I N +L GF
Sbjct: 295 LIVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGF 354
Query: 429 VFLFTVGGLTGVILANSSIDITLHDTY 509
+ F +GGLTGV++A+ DI +HDTY
Sbjct: 355 LSSFMIGGLTGVMVASVPFDIHVHDTY 381
Score = 76.2 bits (179), Expect = 7e-13
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I
Sbjct: 216 ALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI 269
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VV HFHYVL + +P TG +N + ++ F FIG+N+TF P H LG
Sbjct: 383 VVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNEPLGRLHFILTFIGMNLTFMPMHELG 442
Query: 692 L 694
L
Sbjct: 443 L 443
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 79.4 bits (187), Expect = 8e-14
Identities = 37/89 (41%), Positives = 57/89 (64%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V HH FT+G + A+F AT+II++PTG+K+F L TI+ ++ + IL
Sbjct: 326 VLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWT 385
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDT 506
LGF+ F++GG+TGV+LA D LH++
Sbjct: 386 LGFMVTFSIGGMTGVLLAVPGADYVLHNS 414
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
A+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S GK
Sbjct: 250 ALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAGK 309
Query: 190 K 192
+
Sbjct: 310 R 310
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 79.4 bits (187), Expect = 8e-14
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+FT G+ A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F
Sbjct: 298 HHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFV 357
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GG+TGV+LA ++ D HDTY
Sbjct: 358 LGGVTGVMLAAAAADYQFHDTY 379
Score = 70.1 bits (164), Expect = 5e-11
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI 267
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYV+ +P G L+ + KI F FIG ++TFF QHF+G
Sbjct: 381 VVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKISFVLFFIGFHLTFFIQHFVG 440
Query: 692 L 694
L
Sbjct: 441 L 441
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 78.6 bits (185), Expect = 1e-13
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +1
Query: 4 HEAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
+ A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I
Sbjct: 222 NSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F
Sbjct: 307 AHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQF 366
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
+GGLTG++ A ID L DTY
Sbjct: 367 VIGGLTGIMFAAVPIDWQLTDTY 389
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVL +P TG LN I +QF+ +G N+TF QHFLG
Sbjct: 391 VVAHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNERIGILQFWLWVLGFNMTFMVQHFLG 450
Query: 692 L 694
L
Sbjct: 451 L 451
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 190 K 192
K
Sbjct: 319 K 319
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V AHH+FT GID R+ F + ++ I++P+ +K+F + T+ ++ +L
Sbjct: 335 VLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFC 394
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
+GFV F +GG+TGV LA ID+ LHDTY
Sbjct: 395 IGFVQNFIIGGVTGVFLAVIPIDLILHDTY 424
Score = 33.5 bits (73), Expect = 5.1
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VV HFH+++ +P+ TG + F+T +G N TF +LG
Sbjct: 426 VVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQKRLAHAHFWTALVGSNATFLAMLWLG 485
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
+HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ F
Sbjct: 308 SHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASF 367
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
T+GGL+G + A + D HDTY
Sbjct: 368 TIGGLSGFMHAAAPSDAQQHDTY 390
Score = 67.3 bits (157), Expect = 3e-10
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI 278
Score = 38.3 bits (85), Expect = 0.18
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVL + +P G L+ + + F IF G + FP H LG
Sbjct: 392 VVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDERLGRWSFALIFTGFHTFAFPFHILG 451
Query: 692 L 694
L
Sbjct: 452 L 452
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F
Sbjct: 306 AHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMF 365
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
+GG++GV LA+ I++ D+Y
Sbjct: 366 IIGGISGVTLASPPINVQQTDSY 388
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +1
Query: 22 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL 276
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/62 (38%), Positives = 30/62 (48%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAH HYVL +P TG L+ + K QF+ + I N+TFFP H G
Sbjct: 390 VVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLDERLGKWQFWLMLISFNLTFFPMHLSG 449
Query: 692 LA 697
A
Sbjct: 450 NA 451
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/89 (38%), Positives = 55/89 (61%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V HH FT+G +F AT++I++PTG+K+F L TI+ ++ + I+
Sbjct: 325 VLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWT 384
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDT 506
LGF+ F++GG+TGV+LA D LH++
Sbjct: 385 LGFMITFSIGGMTGVLLAVPGADFVLHNS 413
Score = 63.3 bits (147), Expect = 6e-09
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 190 K 192
+
Sbjct: 309 R 309
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 76.2 bits (179), Expect = 7e-13
Identities = 36/85 (42%), Positives = 60/85 (70%), Gaps = 3/85 (3%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVF 434
HH+FT GI + +F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F
Sbjct: 315 HHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLF 373
Query: 435 LFTVGGLTGVILANSSIDITLHDTY 509
+FTVGG+TGV++A ID +HDTY
Sbjct: 374 IFTVGGVTGVMVALVPIDFQVHDTY 398
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVL P F+ L+ + + F+ +FIG N+TFFP H G
Sbjct: 400 VVAHFHYVLIGGMVFPLFATFYYWIPAFSRNMLSERLGRWVFWLMFIGFNVTFFPMHMAG 459
Query: 692 L 694
L
Sbjct: 460 L 460
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 76.2 bits (179), Expect = 7e-13
Identities = 36/90 (40%), Positives = 56/90 (62%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V AHH+F G++ + F T+IIAVP+ +K F + T+ I + P ++
Sbjct: 343 VLSFIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFS 402
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
+G V +F GG+TG+IL N+++DI LHDTY
Sbjct: 403 IGLVSMFISGGVTGIILGNNAMDIQLHDTY 432
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 10/70 (14%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGII 159
A +L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI
Sbjct: 257 AALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGIT 316
Query: 160 SHIISQERGK 189
S +I+ K
Sbjct: 317 SEVIATNARK 326
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFH V+ + +P G ++ + I F+ F+G + FFP H++G
Sbjct: 434 VVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDEKLGYIHFWFTFVGAYLVFFPMHYIG 493
Query: 692 LA 697
+A
Sbjct: 494 IA 495
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/61 (60%), Positives = 46/61 (75%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 190 K 192
+
Sbjct: 350 R 350
Score = 72.5 bits (170), Expect = 9e-12
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V AHH+F G+D RA F + ++ IAVP+ +K F + T+ I +L
Sbjct: 366 VLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFS 425
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
+GFV F +GG+TGV LA+ +D+ LH TY
Sbjct: 426 VGFVANFILGGVTGVFLASIPVDLVLHATY 455
Score = 41.9 bits (94), Expect = 0.015
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VV HFHY++ +PL+TG + K+ F+ IG NITFF LG
Sbjct: 457 VVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQRTLGKMHFWLSMIGTNITFFAMILLG 516
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 74.5 bits (175), Expect = 2e-12
Identities = 31/82 (37%), Positives = 53/82 (64%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+F G++ F AT++IA+P+ +K F L T++G ++ + +L L FV +F
Sbjct: 338 HHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFV 397
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GGL+G+ +A + +DI +HDTY
Sbjct: 398 IGGLSGIFMAATPVDIVIHDTY 419
Score = 59.3 bits (137), Expect = 9e-08
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 11/63 (17%)
Frame = +1
Query: 19 ILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 165
++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+ILP G++S
Sbjct: 246 MMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSD 305
Query: 166 IIS 174
I++
Sbjct: 306 ILA 308
Score = 41.5 bits (93), Expect = 0.019
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
+VAHFHYVL +P G +N KI F FI +N TFF H LG
Sbjct: 421 IVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETAGKIHFALTFIFLNGTFFTMHILG 480
Query: 692 L 694
+
Sbjct: 481 V 481
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/90 (37%), Positives = 56/90 (62%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +L
Sbjct: 321 VLSFLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWA 380
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
L F+ F +GG+TGV+LA ++ D H+TY
Sbjct: 381 LAFIPNFVIGGVTGVMLAMAAADYQYHNTY 410
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS 299
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/61 (44%), Positives = 31/61 (50%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
+V+HFHYVL YP G LN I K F+ IG NI FFPQ+FLG
Sbjct: 412 LVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNERIGKWFFWIFMIGFNICFFPQYFLG 471
Query: 692 L 694
L
Sbjct: 472 L 472
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V AHH+FTVG + F T +IAVPTG+K+F + T+ G ++ +
Sbjct: 291 VLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWV 350
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
LGF+F F +GG+TGV+L+ + +D HD+Y
Sbjct: 351 LGFIFNFLLGGITGVMLSMTPLDYQFHDSY 380
Score = 62.9 bits (146), Expect = 7e-09
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS 269
Score = 37.1 bits (82), Expect = 0.41
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFH VL +P TG + + ++ F+ +G +TF PQ+ LG
Sbjct: 382 VVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERLGRLHFWLFLVGYLLTFLPQYALG 441
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++
Sbjct: 221 ASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVA 275
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/82 (40%), Positives = 53/82 (64%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+F G+ ++FT++++ IAVP G++IF LATI + + L +GF+ +F
Sbjct: 305 HHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFV 364
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GGLTGV++A+ D +HDTY
Sbjct: 365 IGGLTGVMVASVPFDTQVHDTY 386
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVL +P TG ++ + + F IF G N+TFFP H LG
Sbjct: 388 VVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMSETLGRWSFGLIFSGFNLTFFPMHILG 447
Query: 692 L 694
L
Sbjct: 448 L 448
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 117
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 46.4 bits (105), Expect = 7e-04
Identities = 30/68 (44%), Positives = 33/68 (48%)
Frame = +3
Query: 306 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 485
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 486 DITLHDTY 509
DI LHDTY
Sbjct: 282 DIILHDTY 289
Score = 35.9 bits (79), Expect = 0.96
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 625 KNSIFYNIYWSKYNIFSTTFFRFS 696
KN+IF IYWSK+NIFS+T S
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSIS 351
Score = 35.5 bits (78), Expect = 1.3
Identities = 29/94 (30%), Positives = 35/94 (37%)
Frame = +2
Query: 368 SYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXVVAHFHYVLSXX 547
SY + N N P FM IH + + VVAH HYVLS
Sbjct: 243 SYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMG 302
Query: 548 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 649
+PLFTGL+L I F I+
Sbjct: 303 AVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTR 425
Query: 190 K 192
+
Sbjct: 426 R 426
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/82 (30%), Positives = 51/82 (62%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH++ VG+D +R +++ TI+I++P IK+ ++ + + L + F+ LF
Sbjct: 450 HHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFL 509
Query: 444 VGGLTGVILANSSIDITLHDTY 509
V G TG+ L++ S+++++HDT+
Sbjct: 510 VAGFTGMWLSHVSLNVSMHDTF 531
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/88 (39%), Positives = 56/88 (63%)
Frame = +3
Query: 243 IRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RL 422
+ ++ HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +L L
Sbjct: 238 VSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYAL 297
Query: 423 GFVFLFTVGGLTGVILANSSIDITLHDT 506
G VF+F +GGLTG+ L +ID+ + D+
Sbjct: 298 GGVFMFLIGGLTGLPLGMVAIDLGVSDS 325
Score = 71.7 bits (168), Expect = 2e-11
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
A+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 161 AVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 41.5 bits (93), Expect = 0.019
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VV HFHYVL + +PL TG + K+ F+ IF G NI +F Q G
Sbjct: 328 VVGHFHYVLGMAITLGILGAVIHWFPLATGKYYPENLGKLSFWLIFAGANIFYFLQMVAG 387
Query: 692 L 694
+
Sbjct: 388 M 388
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/81 (38%), Positives = 54/81 (66%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH FT+G +F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL
Sbjct: 352 HHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLL 411
Query: 444 VGGLTGVILANSSIDITLHDT 506
VGGLTG++LA +I+ T+H++
Sbjct: 412 VGGLTGMMLAIPAINYTVHNS 432
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 72.5 bits (170), Expect = 9e-12
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +3
Query: 93 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRI 251
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSI 54
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 72.5 bits (170), Expect = 9e-12
Identities = 33/82 (40%), Positives = 50/82 (60%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+FT D R AT+ +A+P+G+K+F +AT++G +I +L L F+ F
Sbjct: 299 HHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFI 358
Query: 444 VGGLTGVILANSSIDITLHDTY 509
VGG+TGV ++D+ LHDTY
Sbjct: 359 VGGVTGVFFPVITLDLHLHDTY 380
Score = 69.3 bits (162), Expect = 8e-11
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Frame = +1
Query: 19 ILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQ 177
+LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +I +
Sbjct: 213 MLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEVIQR 270
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/82 (39%), Positives = 55/82 (67%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F
Sbjct: 311 HHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFI 370
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GGL+GV++A+ D+ HDTY
Sbjct: 371 IGGLSGVMVASVPFDMQAHDTY 392
Score = 63.3 bits (147), Expect = 6e-09
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/61 (44%), Positives = 33/61 (54%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYVL YP FTG ++ + K+ F+ F G N+TFFP H LG
Sbjct: 394 VVAHFHYVLIGGAVFPLLGGLYYWYPKFTGRMMSERLGKVAFWVTFAGFNLTFFPMHKLG 453
Query: 692 L 694
L
Sbjct: 454 L 454
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 71.3 bits (167), Expect = 2e-11
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +1
Query: 19 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 168
+LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 234 MLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/89 (37%), Positives = 50/89 (56%)
Frame = +3
Query: 243 IRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RL 422
+ + V AHH+F G R F T++IA+PTG+K+F L T+ + N +L +
Sbjct: 308 LSLIVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCI 367
Query: 423 GFVFLFTVGGLTGVILANSSIDITLHDTY 509
G + F G+TGV+LA IDI + +TY
Sbjct: 368 GGLINFIFAGITGVMLATVPIDIHVGNTY 396
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFHYV+ + +P FTG + K+ F FIG + + P H+ G
Sbjct: 398 VVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYEGLGKVHFVLTFIGATLNWLPLHWAG 457
Query: 692 L 694
L
Sbjct: 458 L 458
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/81 (38%), Positives = 53/81 (65%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH FT+G A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF
Sbjct: 353 HHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFV 412
Query: 444 VGGLTGVILANSSIDITLHDT 506
+GG+TG++LAN +D +H+T
Sbjct: 413 IGGITGIMLANPILDYQVHNT 433
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 22 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S GK
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSGK 328
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Frame = +1
Query: 19 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 168
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 169 ISQERGK 189
IS K
Sbjct: 298 ISTHARK 304
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH++ G+ +F + T+IIA+PT IK++ + T+ I+ +L LGF+ F
Sbjct: 328 AHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITF 387
Query: 441 TVGGLTGVILANSSIDITLHDT 506
GGLTG+ L N +D+ L DT
Sbjct: 388 VNGGLTGLFLGNVVVDVPLSDT 409
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFH V+ + YP TG LN + K F+ F+G + FFP H+LG
Sbjct: 412 VVAHFHMVMGVAPIMVVLGAIYHWYPKVTGRMLNDVLGKFHFWVTFLGAYLIFFPMHYLG 471
Query: 692 L 694
L
Sbjct: 472 L 472
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 70.1 bits (164), Expect = 5e-11
Identities = 28/55 (50%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +1
Query: 13 ITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
+ +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++
Sbjct: 231 LLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA 285
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/82 (32%), Positives = 41/82 (50%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+F G F T+I+ V T IK+F + T++ + + GF+F
Sbjct: 315 HHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTV 374
Query: 444 VGGLTGVILANSSIDITLHDTY 509
GG+TG+ L S+D+ HDTY
Sbjct: 375 FGGMTGIALGTVSLDVAWHDTY 396
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
A +LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 238 AALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/89 (34%), Positives = 51/89 (57%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V HH+F G+ F T++I++P+ + + + T+ + Y+ +L
Sbjct: 319 VLSAMVYGHHMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFA 378
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDT 506
LG VF+F VGGLTG+ L + S+D+ LHDT
Sbjct: 379 LGTVFVFGVGGLTGLFLGDISMDLYLHDT 407
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N L + F+ +F
Sbjct: 341 HHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFI 400
Query: 444 VGGLTGVILANSSIDITLHDTY 509
VGGL+G+ +A +D+ HDTY
Sbjct: 401 VGGLSGIFMAAVPVDVYFHDTY 422
Score = 52.8 bits (121), Expect = 8e-06
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +1
Query: 67 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
GGG P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
+VAHFHY+L +P G +N + K F FIG N TFFP HFLG
Sbjct: 424 IVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMNEKLGKTHFVLTFIGANGTFFPMHFLG 483
Query: 692 L 694
+
Sbjct: 484 M 484
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/83 (37%), Positives = 55/83 (66%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+ + + LGF+F+F
Sbjct: 330 AHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIF 389
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
+GG+TGV++A ++ HD+Y
Sbjct: 390 VLGGMTGVMVAAVPFNLQAHDSY 412
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +1
Query: 19 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ GK
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
Score = 39.5 bits (88), Expect = 0.078
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAH HYVL P FTG ++ + K F+ +F G N+ FF H G
Sbjct: 414 VVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERLGKWVFWLMFSGFNLAFFMMHLTG 473
Query: 692 L 694
+
Sbjct: 474 M 474
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +1
Query: 19 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/90 (31%), Positives = 50/90 (55%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
+I V HH+F G +I TR +++ TI+I++P + + + T++ ++ Y +L
Sbjct: 289 IISFVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFA 348
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
+G + F +GG TGV L + +ID TY
Sbjct: 349 VGALLNFIIGGSTGVYLGSIAIDRGFRGTY 378
Score = 39.5 bits (88), Expect = 0.078
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFL 688
VVAHFHY+L +P TG + + + KI F +GV +TF PQ L
Sbjct: 380 VVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSERLGKIHFALAMLGVALTFLPQFAL 438
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 67.3 bits (157), Expect = 3e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF 102
AIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 188 AITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = +1
Query: 22 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+F G + +F+ T +I+VPTG+K F + T+ I + ++ +GF+ F
Sbjct: 313 AHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATF 370
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
GGLTG++LA+ +D L D+Y
Sbjct: 371 LFGGLTGIMLASPPLDFHLADSY 393
Score = 39.9 bits (89), Expect = 0.059
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
++AHFHY L +P TG ++ + KI F+ F+G + TF QH++G
Sbjct: 395 LIAHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDERLGKIHFWLTFVGFHGTFLIQHWVG 454
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +3
Query: 168 YFTRKRKKRNFWLFRNNLCYTSNWVIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 347
Y K FW +CY N + V HH+FTVG+D++T +F+S T+II VPTG
Sbjct: 21 YVKNKYVSSCFWFLWFVVCYVFNMCMGSSVWGHHMFTVGLDVNTAVFFSSVTMIIRVPTG 80
Query: 348 IKIFR*LATIHGTQINYNPNIL 413
IK+F L + +++N IL
Sbjct: 81 IKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +1
Query: 31 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 201
+R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ + ++E F
Sbjct: 210 ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKMARREIF 265
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F
Sbjct: 288 HHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFL 347
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GG+TGV ID L+ TY
Sbjct: 348 LGGITGVFFPLVPIDYALNGTY 369
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH++ G+ R T++I++P G+ + + T++G I++ +L LGF+FLF
Sbjct: 290 HHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFL 349
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GGLTGV LA S+ + L +TY
Sbjct: 350 IGGLTGVPLALVSLTVHLSETY 371
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
Score = 39.5 bits (88), Expect = 0.078
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VV HFHYV++ +P TG N I K F+ F+GVNI F+ +G
Sbjct: 373 VVGHFHYVMAVAGTFAIFGGVYYIFPKMTGKMYNETIGKWAFWITFVGVNIVFWIMMDIG 432
Query: 692 L 694
+
Sbjct: 433 V 433
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 66.1 bits (154), Expect = 8e-10
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF 102
AIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 205 AITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 162
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/90 (35%), Positives = 52/90 (57%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
+I V HH+F GI A+F +A+++I++P+ + +F +ATI + + L
Sbjct: 317 LIGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYF 376
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDTY 509
GFV +F VGG++GV+ A +D L DTY
Sbjct: 377 AGFVLMFVVGGVSGVMTAAVPLDWQLTDTY 406
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAH HYVL +P FTG +N K+ F+ + +G N+ FFP H G
Sbjct: 408 VVAHLHYVLLGINVFPVLGGVAYWFPKFTGRMMNERFGKLTFWVVLVGFNLGFFPMHISG 467
Query: 692 L 694
L
Sbjct: 468 L 468
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 207 ALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 440
AHH+F G+ + F T+ + + +F +AT+ +I ++ ++ +G + LF
Sbjct: 290 AHHMFATGMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALF 349
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
G GV+ A +D T HDTY
Sbjct: 350 FSAGAGGVLNAAMPLDFTTHDTY 372
Score = 39.1 bits (87), Expect = 0.10
Identities = 20/61 (32%), Positives = 26/61 (42%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VV HFH + +P TG N + KI F F+G + FF QH LG
Sbjct: 374 VVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRMYNEKLGKIHFVFSFVGAVLLFFTQHILG 433
Query: 692 L 694
+
Sbjct: 434 I 434
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 156
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 157 ISHII 171
+SHI+
Sbjct: 302 VSHIL 306
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+F G++ + F+ T+II +P + L +++G+++ N L LGF+ +F
Sbjct: 337 HHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFV 396
Query: 444 VGGLTGVILANSSIDITLHDTY 509
GG++G LA SIDI LH TY
Sbjct: 397 SGGVSGFFLAQPSIDIYLHATY 418
Score = 41.5 bits (93), Expect = 0.019
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VV HFH V+ +P TG +N + KI F+ FIG F P H+LG
Sbjct: 420 VVGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETLGKIHFWGTFIGAYCIFMPFHYLG 479
Query: 692 L 694
+
Sbjct: 480 M 480
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/89 (33%), Positives = 53/89 (59%)
Frame = +3
Query: 240 VIRIYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 419
V+ V HH FT+G + +F+ +T+IIA+PTG+KIF + TI + +
Sbjct: 320 VLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWF 379
Query: 420 LGFVFLFTVGGLTGVILANSSIDITLHDT 506
+ F+ +F++GG +GVIL+ ++D H++
Sbjct: 380 ISFIIIFSIGGFSGVILSIPNLDFIFHNS 408
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +1
Query: 22 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 141
IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 207 ITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I +GF+F F
Sbjct: 307 HHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFL 366
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GG+TGV L D + +Y
Sbjct: 367 IGGITGVSLGMIPFDYQVTMSY 388
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 40 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS 277
Score = 37.5 bits (83), Expect = 0.31
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
VVAHFH V+ +P TG L+ + F+ IG +TF PQ+ LG
Sbjct: 390 VVAHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDEKVGLAHFWLFMIGSWLTFLPQYILG 449
Query: 692 L 694
L
Sbjct: 450 L 450
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 63.3 bits (147), Expect = 6e-09
Identities = 30/82 (36%), Positives = 52/82 (63%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+FT G+ + +F++A+ + +PTGI++F +AT+ ++ +L G + +FT
Sbjct: 331 HHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFT 390
Query: 444 VGGLTGVILANSSIDITLHDTY 509
GGLTGV++A + D +HDTY
Sbjct: 391 AGGLTGVMVAIAPFDWQVHDTY 412
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 31 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
Score = 43.2 bits (97), Expect = 0.006
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
+VAH HY L YP+ T +L+ + + F+ +F G N+TF P H G
Sbjct: 414 IVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALSERLGRWSFWLLFTGFNVTFLPMHLTG 473
Query: 692 L 694
L
Sbjct: 474 L 474
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFV 431
HH+FT GI + ++F +A+ +A+P+G+++F +AT + I L LGF+
Sbjct: 374 HHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFL 433
Query: 432 FLFTVGGLTGVILANSSIDITLHDTY 509
F+F +GGLTGV++A D HD+Y
Sbjct: 434 FIFVLGGLTGVMVAVIPFDWQAHDSY 459
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLG 691
+VAH HYVL P + +L+ + + F +F+G NITFFP HF G
Sbjct: 461 IVAHLHYVLVGGMVFPLFAAFYYWMPYTSRQALSERLGRWVFGLMFVGFNITFFPMHFTG 520
Query: 692 LA 697
LA
Sbjct: 521 LA 522
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 62.1 bits (144), Expect = 1e-08
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +1
Query: 10 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV 277
Score = 57.6 bits (133), Expect = 3e-07
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+FT G F ++ + + T IK+F AT++ I + GF+F
Sbjct: 308 HHMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLV 367
Query: 444 VGGLTGVILANSSIDITLHDTY 509
GG+TG+ LA S+D+ HDTY
Sbjct: 368 FGGMTGIALATVSLDVHWHDTY 389
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 114
+T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 207 VTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+FT GI A+F++A+ ++AVPT +++F + T+ + +L L F F
Sbjct: 305 HHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFV 364
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GGLTGV++A D +HDTY
Sbjct: 365 IGGLTGVMVAIVPFDWQVHDTY 386
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 19 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLF 440
HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF+FLF
Sbjct: 30 HHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLF 89
Query: 441 TVGGLTG 461
T+GG G
Sbjct: 90 TMGGRQG 96
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 141
+T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 212 LTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +1
Query: 19 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLF 440
HH+FT GI A F++A+ ++AVPT +++F + T+ GT P ++ L F F
Sbjct: 305 HHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATF 363
Query: 441 TVGGLTGVILANSSIDITLHDTY 509
+GGLTGV++A D +HDT+
Sbjct: 364 VIGGLTGVMVAVVPFDWQVHDTH 386
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 2/45 (4%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 141
+T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 224 LTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH+F GI++ + F + TI I++P + +F + T+ ++ + L LG + LF
Sbjct: 311 HHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFI 370
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GG+TGV L +D TY
Sbjct: 371 IGGITGVFLGAIVLDYQFRGTY 392
Score = 46.4 bits (105), Expect = 7e-04
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Frame = +1
Query: 10 AITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 156
A+ IL +D L T++F D G +L+ HLF FFGHPEVYI+ P G+
Sbjct: 216 ALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPALGV 275
Query: 157 ISHIISQERGKK 192
++ G++
Sbjct: 276 MAECFQTFTGRR 287
Score = 40.7 bits (91), Expect = 0.034
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFP 676
VVAHFHYV+ YP TG N + KIQF F+G N+ +FP
Sbjct: 394 VVAHFHYVMVAGATALFGGLYYW-YPKITGKMYNETLGKIQFGVYFLGFNLLYFP 447
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +3
Query: 270 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 359
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = -2
Query: 101 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIA 9
NKC + IGSPPPAGSK +VFKFRSV +IVIA
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIA 30
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/48 (56%), Positives = 35/48 (72%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 156
+T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 224 LTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 51.2 bits (117), Expect = 2e-05
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = +1
Query: 556 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFS 696
CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSIS 137
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3
Query: 291 IDTRAYFTSATIIIAVPTGIKIFR*LAT 374
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH FT D + T T +++PTG + TI G ++ N +L L + F
Sbjct: 382 HHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFL 440
Query: 444 VGGLTGVILANSSIDITLHDTY 509
+GGLTG+ A+ D+ LH+TY
Sbjct: 441 IGGLTGIFNADVPADLQLHNTY 462
Score = 36.7 bits (81), Expect = 0.55
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +1
Query: 49 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 171
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +3
Query: 261 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 383
AHH+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 53 AHHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 106 FFGHPEVYILILPGFGIISHI 168
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 141
IT+LL+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 39 ITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +1
Query: 556 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFF 687
CNY IY L+ + F K KNSI+ NIY SK NIFS TFF
Sbjct: 91 CNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFF 134
Score = 34.3 bits (75), Expect = 2.9
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 356 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQF 478
F MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQF 64
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +1
Query: 19 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 174
+LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 238 LLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
Score = 41.1 bits (92), Expect = 0.025
Identities = 26/87 (29%), Positives = 42/87 (48%)
Frame = +3
Query: 249 IYV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGF 428
+ V HH F GI + T I++PT + I +AT+ G + + IL L
Sbjct: 313 VMVFLHHTFMTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAA 372
Query: 429 VFLFTVGGLTGVILANSSIDITLHDTY 509
F +GG++GV ++ +ID +H Y
Sbjct: 373 STSFMIGGVSGVTQSSLAIDTIVHGDY 399
Score = 38.7 bits (86), Expect = 0.14
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFL 688
VVAHFHY + +P FTG + + +I + + GVNI +FP FL
Sbjct: 401 VVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSEKLGRIHWAFAYPGVNILYFPMFFL 459
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 626 KIQFFTIFIGVNITFFPQHFLGLA 697
KI F +F+GVN+TFFPQHFLGLA
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLA 423
Score = 36.7 bits (81), Expect = 0.55
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +1
Query: 13 ITILLTDRNLNTSFFDP 63
IT+LLTDRNLNT+FFDP
Sbjct: 195 ITMLLTDRNLNTTFFDP 211
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 44.8 bits (101), Expect = 0.002
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = -3
Query: 532 IMKMSYYI*VSCNVISIEELAKIXXXXXXXXXXXXXXNLHKILGL*L-I*VPCIVASHLK 356
+MKMS VS N SI E +H ++G VP + +H K
Sbjct: 1 MMKMSNTNQVSWNKASITEAESTIPVTPPMVKSTXNPIIHHMIGSHSRSRVPASMYNHEK 60
Query: 355 ILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 254
LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 61 TLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = +3
Query: 12 YYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 116
+Y IIN K KY IF W P +STFILIFWT
Sbjct: 118 HYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 39.5 bits (88), Expect = 0.078
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +3
Query: 3 ARGYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRK 182
+R +N N SKL++I+ S PN I ILI T L+ N T I ++
Sbjct: 107 SRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNSTSIRNRITHLHNIF 166
Query: 183 RKKRNFWLFRNNLCYTSNW 239
+K N ++NNL ++ W
Sbjct: 167 SQKSNILYYKNNLRHSIYW 185
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 37.5 bits (83), Expect = 0.31
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +3
Query: 93 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 239
T ILI W S+Y F IW +F+ T FW+ N L + SNW
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNW 49
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 70 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 186
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 118 PEVYILILPGFGIISHIISQERGKK 192
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.2
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 76 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 189
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 33.9 bits (74), Expect = 3.9
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 512 VVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSY-ILKIQFFTIFIGVNITFFPQHFL 688
+ HFH + + + +P TG +L +++ Q + FIG+ +T FP H++
Sbjct: 363 ITGHFHLIFAGAIVTMYFAIAYDLWPHLTGRALTHVRLMRWQLWLWFIGMIVTTFPWHWV 422
Query: 689 GL 694
G+
Sbjct: 423 GI 424
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 82 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 189
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 32.7 bits (71), Expect = 8.9
Identities = 19/81 (23%), Positives = 34/81 (41%)
Frame = +3
Query: 264 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 443
HH++ V + I + T + +P+ + F AT G + +N +
Sbjct: 297 HHLYMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAI 356
Query: 444 VGGLTGVILANSSIDITLHDT 506
G+TG+ A S D +H+T
Sbjct: 357 AAGVTGISNATISFDAIVHNT 377
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,556,372
Number of Sequences: 1657284
Number of extensions: 8338493
Number of successful extensions: 18555
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 17744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18466
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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