Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0369
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.45 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 301 YFGFCYLVILLMIYFYESVF 360
           Y+ +C L+ILL IY++   F
Sbjct: 286 YYFYCALIILLCIYYFCRAF 305



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 310 FCYLVILLMIYFYESVF 360
           +C L+ILL IY++   F
Sbjct: 229 YCVLIILLCIYYFYYAF 245


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = +1

Query: 301 YFGFCYLVILLMI 339
           ++GFCYL +L++I
Sbjct: 172 FYGFCYLWVLILI 184


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +1

Query: 304 FGFCYLVILLMIYF-YESV 357
           F FCY + L  +Y+ Y SV
Sbjct: 145 FVFCYFIYLFTVYYIYYSV 163


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 111 LYSMKNTNSVFLINFNKFIVTI 46
           LY++   + V LI F  F+V +
Sbjct: 170 LYTLSKMSQVMLIQFCAFVVVL 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,074
Number of Sequences: 336
Number of extensions: 2837
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)