Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0369
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022693-1|AAY55109.1|  184|Drosophila melanogaster IP07178p pro...    32   0.65 
BT022606-1|AAY55022.1|  160|Drosophila melanogaster IP06878p pro...    32   0.65 
AE013599-1491|AAM68685.1|  189|Drosophila melanogaster CG30051-P...    32   0.65 
AE014298-1099|AAF46305.3| 1425|Drosophila melanogaster CG2212-PA...    30   2.6  
AE013599-1427|AAF58547.1|  311|Drosophila melanogaster CG13169-P...    29   8.0  

>BT022693-1|AAY55109.1|  184|Drosophila melanogaster IP07178p
           protein.
          Length = 184

 Score = 32.3 bits (70), Expect = 0.65
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +1

Query: 253 HI*NTSYVXXXXXXRNYFGFCYLVILLMIYFYESVFSD*ECRNVSKVSFYRYVDKFQSAF 432
           HI  T+         N+  F +LV+LL +YF ES+ ++    N S  S  +Y D     F
Sbjct: 68  HILTTTTALLSRNSSNFQVFLFLVLLLAVYFTESI-NEFAANNWSSFSRQQYFDS-NGLF 125

Query: 433 IYLVF 447
           I  VF
Sbjct: 126 ISTVF 130


>BT022606-1|AAY55022.1|  160|Drosophila melanogaster IP06878p
           protein.
          Length = 160

 Score = 32.3 bits (70), Expect = 0.65
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +1

Query: 253 HI*NTSYVXXXXXXRNYFGFCYLVILLMIYFYESVFSD*ECRNVSKVSFYRYVDKFQSAF 432
           HI  T+         N+  F +LV+LL +YF ES+ ++    N S  S  +Y D     F
Sbjct: 44  HILTTTTALLSRNSSNFQVFLFLVLLLAVYFTESI-NEFAANNWSSFSRQQYFDS-NGLF 101

Query: 433 IYLVF 447
           I  VF
Sbjct: 102 ISTVF 106


>AE013599-1491|AAM68685.1|  189|Drosophila melanogaster CG30051-PB
           protein.
          Length = 189

 Score = 32.3 bits (70), Expect = 0.65
 Identities = 22/65 (33%), Positives = 31/65 (47%)
 Frame = +1

Query: 253 HI*NTSYVXXXXXXRNYFGFCYLVILLMIYFYESVFSD*ECRNVSKVSFYRYVDKFQSAF 432
           HI  T+         N+  F +LV+LL +YF ES+ ++    N S  S  +Y D     F
Sbjct: 73  HILTTTTALLSRNSSNFQVFLFLVLLLAVYFTESI-NEFAANNWSSFSRQQYFDS-NGLF 130

Query: 433 IYLVF 447
           I  VF
Sbjct: 131 ISTVF 135


>AE014298-1099|AAF46305.3| 1425|Drosophila melanogaster CG2212-PA,
           isoform A protein.
          Length = 1425

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 346 YESVFSD*ECRNVSKVSFYRYVDKFQSAFIYLVFLGWTCYFMR 474
           Y ++FSD  C+ VSK         F    + L+F+ W  YF R
Sbjct: 15  YNTIFSDAWCQYVSKQITATVYMYFALVMMSLLFIAWFLYFKR 57


>AE013599-1427|AAF58547.1|  311|Drosophila melanogaster CG13169-PA
           protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 132 ITRGRSRNSRRALVILGRDSDPSQS 206
           I RGR+  SRR+++I+G  S  S S
Sbjct: 170 IARGRATTSRRSVIIIGNGSSSSSS 194


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,183,622
Number of Sequences: 53049
Number of extensions: 434797
Number of successful extensions: 547
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)