Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0369
         (699 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g17340.1 68414.m02113 phosphoinositide phosphatase family pro...    29   3.0  

>At1g17340.1 68414.m02113 phosphoinositide phosphatase family
           protein contains similarity to phosphoinositide
           phosphatase SAC1 [Rattus norvegicus]
           gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
           SacI homology domain; identical to cDNA SAC domain
           protein 5 (SAC5)  GI:31415726
          Length = 785

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 543 NIYNLILQHYITSLADSD*VKYVNNTIESFKERLNKKELWE 665
           +I+  + ++Y  +  DSD    +N  +  F+ RL +  LWE
Sbjct: 556 DIFTAVRRYYSNAYQDSDKQNAINVFLGHFRPRLGRPALWE 596


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,835,708
Number of Sequences: 28952
Number of extensions: 211592
Number of successful extensions: 377
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)