Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0368
         (701 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.76 
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   9.3  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   9.3  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   9.3  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   9.3  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.6 bits (56), Expect = 0.76
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 314 NKVVHFFLTVFCQGYNVSFFLH*KYLLQVTIEYTELFGY 430
           NK+V+F +   C   NVSF     +L Q+  E   LF +
Sbjct: 621 NKLVNFKVNTTCYEQNVSFEYEGNWLKQINQEDRPLFKF 659


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 345 FVKVIMSVFFFIKNIYFK 398
           F +VI   +F+ KN+YFK
Sbjct: 659 FDRVINFNYFYTKNMYFK 676


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 345 FVKVIMSVFFFIKNIYFK 398
           F +VI   +F+ KN+YFK
Sbjct: 659 FDRVINFNYFYTKNMYFK 676


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 345 FVKVIMSVFFFIKNIYFK 398
           F +VI   +F+ KN+YFK
Sbjct: 659 FDRVINFNYFYTKNMYFK 676


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 345 FVKVIMSVFFFIKNIYFK 398
           F +VI   +F+ KN+YFK
Sbjct: 659 FDRVINFNYFYTKNMYFK 676


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,154
Number of Sequences: 2352
Number of extensions: 7960
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)