Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0367
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF237711-1|AAF43447.1|  623|Drosophila melanogaster Diablo protein.    30   2.6  
BT010272-1|AAQ23590.1|  623|Drosophila melanogaster RE13447p pro...    29   8.1  
AE014298-2921|AAF49010.2|  580|Drosophila melanogaster CG14230-P...    29   8.1  
AE014296-2581|AAF49578.1|  623|Drosophila melanogaster CG6224-PA...    29   8.1  
AB027612-1|BAD06413.1|  623|Drosophila melanogaster kelch-like p...    29   8.1  

>AF237711-1|AAF43447.1|  623|Drosophila melanogaster Diablo protein.
          Length = 623

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 279 HLKRLKETLPLLRLRAHFL**TMGFILFTR--QICRDQKDKAPGFFFLNNQRP 431
           HL ++ + + L  L   FL  T+G  L  R  ++CRD  D+A  +  L  +RP
Sbjct: 253 HLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEVCRDLVDEAKNYLLLPQERP 305


>BT010272-1|AAQ23590.1|  623|Drosophila melanogaster RE13447p
           protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 279 HLKRLKETLPLLRLRAHFL**TMGFILFTR--QICRDQKDKAPGFFFLNNQRP 431
           HL ++ + + L  L   FL  T+G  L  R  + CRD  D+A  +  L  +RP
Sbjct: 253 HLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERP 305


>AE014298-2921|AAF49010.2|  580|Drosophila melanogaster CG14230-PA
           protein.
          Length = 580

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = +3

Query: 522 LRFCVITGGNWNF*FDAFGSRNGKDVGTYQWRLNSLYRQYILVGKYASIKL 674
           LR  + T G      D FGS   K+V   Q +L  L  + ILVGK ++ KL
Sbjct: 406 LRDSLNTRGEGFSLLDMFGSAPEKEVAKRQDQLEKLGHEKILVGKTSANKL 456


>AE014296-2581|AAF49578.1|  623|Drosophila melanogaster CG6224-PA
           protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 279 HLKRLKETLPLLRLRAHFL**TMGFILFTR--QICRDQKDKAPGFFFLNNQRP 431
           HL ++ + + L  L   FL  T+G  L  R  + CRD  D+A  +  L  +RP
Sbjct: 253 HLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERP 305


>AB027612-1|BAD06413.1|  623|Drosophila melanogaster kelch-like
           protein protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 279 HLKRLKETLPLLRLRAHFL**TMGFILFTR--QICRDQKDKAPGFFFLNNQRP 431
           HL ++ + + L  L   FL  T+G  L  R  + CRD  D+A  +  L  +RP
Sbjct: 253 HLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERP 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,194,580
Number of Sequences: 53049
Number of extensions: 640192
Number of successful extensions: 1184
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)