Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0367
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49909-17|CAD60413.1|  303|Caenorhabditis elegans Hypothetical p...    29   4.3  
Z82288-1|CAB05322.2|  479|Caenorhabditis elegans Hypothetical pr...    28   7.4  

>Z49909-17|CAD60413.1|  303|Caenorhabditis elegans Hypothetical
           protein C14A4.15 protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +1

Query: 337 NKPWDLFCLPD----KFVVTRKIRHPVFFSSTTNVQTS 438
           + PW LFCL      KF+  RKIR  +F ++ + ++TS
Sbjct: 267 SNPWLLFCLSSTFRHKFLEARKIRR-IFAAAPSTIETS 303


>Z82288-1|CAB05322.2|  479|Caenorhabditis elegans Hypothetical
           protein ZK896.1 protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 135 SIKRTKAQIITQVYNYLTKVEYNSKTLYFYVEPLSAL 245
           S+  T +  +T   NY T++    K L+F+++P + L
Sbjct: 81  SVDSTSSFTVTDSANYTTQITSAKKELFFWMDPSATL 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,094,402
Number of Sequences: 27780
Number of extensions: 354108
Number of successful extensions: 801
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)