Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0365
         (703 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1098 - 9017236-9018660                                           30   1.5  
12_01_0755 - 6846091-6847084,6847130-6847353                           30   2.0  
03_06_0673 - 35446537-35446629,35447001-35448548                       30   2.0  
04_03_0141 + 11767781-11767880,11767953-11769262                       29   2.7  
10_01_0029 - 369791-370637,370704-371218                               29   4.7  
05_01_0106 + 702504-702687,702856-703037,703070-703933                 29   4.7  
03_05_0025 + 19938138-19938306,19938899-19939505,19939613-199397...    29   4.7  
03_04_0249 - 19341182-19342237,19342284-19342505                       29   4.7  

>06_01_1098 - 9017236-9018660
          Length = 474

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 592 SVFFHPQYFLFGKRSNSY 645
           +VFFHPQY  FG + N Y
Sbjct: 368 NVFFHPQYAYFGMQPNEY 385


>12_01_0755 - 6846091-6847084,6847130-6847353
          Length = 405

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 592 SVFFHPQYFLFGKRSNSY 645
           S FFHPQY  FG + N Y
Sbjct: 316 SAFFHPQYAYFGMQPNEY 333


>03_06_0673 - 35446537-35446629,35447001-35448548
          Length = 546

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +1

Query: 37  NPSFFGHCKNLKGYFRICLISVMAVIFKNANLLHLSKYKN 156
           +P++ G C N++G   +C +  + VI   A+  H   ++N
Sbjct: 202 SPTYHGICSNIQGIVNVCHLQGIPVIVDEAHGAHFRFHRN 241


>04_03_0141 + 11767781-11767880,11767953-11769262
          Length = 469

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 586 NWSVFFHPQYFLFGKRSNSY 645
           N + FFHPQY  FG + N Y
Sbjct: 361 NPNAFFHPQYAYFGMQPNEY 380


>10_01_0029 - 369791-370637,370704-371218
          Length = 453

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 592 SVFFHPQYFLFGKRSNSY 645
           + FFHPQY  FG + N Y
Sbjct: 348 NAFFHPQYAYFGMQPNEY 365


>05_01_0106 + 702504-702687,702856-703037,703070-703933
          Length = 409

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 592 SVFFHPQYFLFGKRSNSY 645
           + FFHPQY  FG + N Y
Sbjct: 303 NAFFHPQYAYFGMQPNEY 320


>03_05_0025 +
           19938138-19938306,19938899-19939505,19939613-19939723,
           19941891-19941972,19942033-19942080
          Length = 338

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 592 SVFFHPQYFLFGKRSNSY 645
           + FFHPQY  FG + N Y
Sbjct: 197 NTFFHPQYAYFGMQPNEY 214


>03_04_0249 - 19341182-19342237,19342284-19342505
          Length = 425

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 592 SVFFHPQYFLFGKRSNSY 645
           + FFHPQY  FG + N Y
Sbjct: 353 NAFFHPQYAYFGMQPNEY 370


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,625,791
Number of Sequences: 37544
Number of extensions: 244737
Number of successful extensions: 529
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)