Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0364
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   4.9  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   8.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   8.5  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +2

Query: 410 IPDAEAKSADIKVEEPAAQPEDSKTEVQATVAEFQKKKNLVLLMQKVLPTQL 565
           +P  EA    ++  + +A P D   ++ A     Q   N+ LL Q+ +P ++
Sbjct: 489 LPPREAPLVGVQPHQDSATPADQPLDLSAKPKNSQ-DNNISLLEQQKIPLRM 539


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = -3

Query: 466  LSSWFFHFNISRFC 425
            +S+W +H N+++ C
Sbjct: 1674 MSTWGYHHNVNKHC 1687


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/42 (26%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +3

Query: 222 PTEVAAATEEKKPNLLQLVTTR----YPLYQRPKRTI*PQKT 335
           P  V+ ++  ++P   ++  T+    +P Y+RP+ T  P+ T
Sbjct: 130 PPSVSLSSPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRAT 171


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 413 ESRMILLPGLFLRFSL 366
           ES  +LLP ++LR++L
Sbjct: 249 ESEDVLLPSVYLRWNL 264


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 298 YSGYLVVTNWSRFGFFSSVAAATSVGLT 215
           ++G  + T W  +  + ++ A  S GLT
Sbjct: 163 WTGKNITTPWDYYYIYHTLVAEQSYGLT 190


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 298 YSGYLVVTNWSRFGFFSSVAAATSVGLT 215
           ++G  + T W  +  + ++ A  S GLT
Sbjct: 178 WTGKNITTPWDYYYIYHTLVAEQSYGLT 205


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 298 YSGYLVVTNWSRFGFFSSVAAATSVGLT 215
           ++G  + T W  +  + ++ A  S GLT
Sbjct: 66  WTGKNITTPWDYYYIYHTLVAEQSYGLT 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,441
Number of Sequences: 438
Number of extensions: 2684
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)