Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0361
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 114 7e-26
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 36 0.021
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 32 0.34
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 32 0.34
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 31 0.79
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical ... 30 1.4
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical p... 29 3.2
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 3.2
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 29 4.2
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical ... 28 5.6
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 5.6
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 27 9.8
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 27 9.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 27 9.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 27 9.8
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 27 9.8
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 27 9.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 27 9.8
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 114 bits (274), Expect = 7e-26
Identities = 56/106 (52%), Positives = 73/106 (68%)
Frame = +1
Query: 256 KVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKA 435
K+VGRAG GVDNIDV +A + V+N P AN+ SA ELTCTL+L L+RHV A+ ++KA
Sbjct: 71 KLVGRAGTGVDNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASMKA 130
Query: 436 GRWDRALYTGSELAGQDPRHPWPWRVGREVATRMYAFGMNIIGFDP 573
G+W R + G E+ G+ R+G EVA R+ AFGM +IGFDP
Sbjct: 131 GKWARKDFMGEEVYGRTLAVLGLGRIGSEVAVRLQAFGMKVIGFDP 176
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +2
Query: 50 MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTK 229
M I VLI D + +C ++L GI T K K +K+ELL+ +P HDA++VRSAT++T
Sbjct: 1 MSAPINKVLIADDIEQECVDILKQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITA 60
Query: 230 EVLDA 244
E+L A
Sbjct: 61 ELLAA 65
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 52.0 bits (119), Expect = 4e-07
Identities = 43/114 (37%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Frame = +1
Query: 256 KVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLAR----HVVPAST 423
KVV R G G+DNIDV +A + G+ V +APG + T +L+L L R H S
Sbjct: 244 KVVFRIGYGIDNIDVKAATELGIAVCHAPGDYVEDVADSTLSLILDLFRRTYWHAKSYSE 303
Query: 424 ALKAGRWD--RALYTGS-ELAGQDPRHPWPWRVGREVATRMYAFGMNIIGFDPF 576
K D R GS ++ G RVG V R AFG++II +DPF
Sbjct: 304 TRKTIGADQVRENAVGSKKVRGSVLGILGCGRVGTAVGLRARAFGLHIIFYDPF 357
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 36.3 bits (80), Expect = 0.021
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = -2
Query: 653 VDPLEAKCPPAPSWCNGTGRTDQQTRKGSNPMMFMPKAYILV-ATSRPTRQGQGWRGSCP 477
V+P+ A C P P+ NG RT R GSN K YILV A+ R + + W S P
Sbjct: 11 VNPI-AMCHPLPNIENGFIRTAGDLRFGSNAEYGCNKGYILVGASQRRCQANKEWSSSQP 69
Query: 476 ASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHAL 357
L + F AV G+++ +++ +V+ + +
Sbjct: 70 VCRLQLKCGPPPEIPF-AVHDGSSFSGEYDLDAEVAYNCI 108
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 395 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFA-SRLRPTPL 228
R+N ++ SS + P A P P +PA + + STP PA P A S R PL
Sbjct: 150 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSPKREEPL 205
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 395 RTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFA-SRLRPTPL 228
R+N ++ SS + P A P P +PA + + STP PA P A S R PL
Sbjct: 510 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSPKREEPL 565
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 31.1 bits (67), Expect = 0.79
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -2
Query: 479 PASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSAL-APGALITPTPFLPAE 303
PA LP R++L A A ++ I + + L+ L +PGA T P P
Sbjct: 174 PAPPLPEGLHRTNLSVIGATSAQPE-KSEAEIALSLPVPPLTPLPSPGAQSTAPPVFPTS 232
Query: 302 STSMLSTPAPARP 264
+ + STP P P
Sbjct: 233 TPTPTSTPTPLLP 245
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 472 ARCQCTEPGPTCQPSAQWKLGPRGEP 395
A CQC PTC P GP G+P
Sbjct: 92 AWCQCEPTKPTCPPGPPGPPGPAGQP 117
>AC024211-8|AAF36062.1| 832|Caenorhabditis elegans Hypothetical
protein Y76B12C.1 protein.
Length = 832
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = -2
Query: 455 RARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPA 276
R+ +L A SA T ++++V V+ +LS PG L P+ E ++
Sbjct: 24 RSVRYLRALSAKNQERTANEHSSVDVAVTQASLSVPRPGILRLPSSDPGEEDPQPSTSSI 83
Query: 275 PARPTTFASRLRPTP 231
P RP+ +A+ +P
Sbjct: 84 PHRPSKWATVREKSP 98
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 335 LITPTPFLPAESTSMLSTPAP-ARPTTFASRLRPTP 231
LIT T P +T+ L TPAP + P+ S PTP
Sbjct: 122 LITETTTQPPTTTTTLETPAPESTPSMAPSHTDPTP 157
>Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical
protein Y57G11C.42 protein.
Length = 661
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = -1
Query: 534 PSGHLAADPPRPRMARVLPSELAASVQSPVPPASLQRSGSWDHVASQNQHQRAGQLARAQ 355
PS + D P+P + P++ Q+P PPAS S S D V ++++ + +G Q
Sbjct: 222 PSENAVVDSPQPFVTSPPPAQPLFPQQTPPPPASPLISNSGD-VFARSRKEISGAPDSEQ 280
Query: 354 RIGA 343
+ G+
Sbjct: 281 QSGS 284
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = -2
Query: 440 LPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPT 261
+P F+ + T + SS A P A+ TP P P S + AP P+
Sbjct: 2589 IPLFNEMSGNGTGSGAAPSSKAASSRPTPAATPLAVATPKPSTPKVEKSSATPSAPETPS 2648
Query: 260 TFAS 249
A+
Sbjct: 2649 ASAT 2652
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 466 CQCTEPGPTCQPSAQWKLGPRGEPEPT 386
CQC P C P G RGEP P+
Sbjct: 100 CQCEPIRPKCPPGPPGPPGCRGEPGPS 126
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = -2
Query: 356 SALAPGALITPTPFLPAESTSML---STPAPARPTTFASRLRPTPLWSLELLNAQ 201
S + ++IT +P+ P++STS + +TP+P P T + P+P S + + Q
Sbjct: 858 STSSGSSMITQSPY-PSQSTSPVESSTTPSPGSPGTTLTSTSPSPSQSTTIGSTQ 911
>Z83317-2|CAB05899.1| 470|Caenorhabditis elegans Hypothetical
protein F13G11.1b protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 338 ALITPTPFLPAESTSMLSTPAPARPTTFASRLRPTPLWSLELLNAQP 198
++ITPT FL STS P TT R TP+ + ++ +P
Sbjct: 302 SMITPTSFLDIPSTSSPMLPFQISTTTSPMLQRQTPILTPQMSPFKP 348
>Z83317-1|CAB05898.1| 510|Caenorhabditis elegans Hypothetical
protein F13G11.1a protein.
Length = 510
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 338 ALITPTPFLPAESTSMLSTPAPARPTTFASRLRPTPLWSLELLNAQP 198
++ITPT FL STS P TT R TP+ + ++ +P
Sbjct: 342 SMITPTSFLDIPSTSSPMLPFQISTTTSPMLQRQTPILTPQMSPFKP 388
>Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical
protein C07G2.2c protein.
Length = 509
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Frame = -1
Query: 507 PRPRMARVLPSELAASVQSPV----PPASLQRS---GSWDHVASQNQ 388
P P ++P + +S SP+ P S Q+S GSWDH+ + Q
Sbjct: 271 PFPGTTLLVPPKTVSSYHSPLGASSQPPSTQKSPADGSWDHINGEKQ 317
>Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical
protein C07G2.2b protein.
Length = 460
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Frame = -1
Query: 507 PRPRMARVLPSELAASVQSPV----PPASLQRS---GSWDHVASQNQ 388
P P ++P + +S SP+ P S Q+S GSWDH+ + Q
Sbjct: 222 PFPGTTLLVPPKTVSSYHSPLGASSQPPSTQKSPADGSWDHINGEKQ 268
>Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical
protein C07G2.2a protein.
Length = 457
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Frame = -1
Query: 507 PRPRMARVLPSELAASVQSPV----PPASLQRS---GSWDHVASQNQ 388
P P ++P + +S SP+ P S Q+S GSWDH+ + Q
Sbjct: 222 PFPGTTLLVPPKTVSSYHSPLGASSQPPSTQKSPADGSWDHINGEKQ 268
>AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical
protein VW02B12L.3 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = -1
Query: 534 PSGHLAADPPRPRMARVLPSELAASVQSPVPPASLQRSGSWDHVASQNQHQRAGQLARAQ 355
P+ +AA PP+PR A P+ A +V++ VPP R+G+ A+ +RA A +
Sbjct: 151 PARPVAAAPPKPRPA--APAVAAPAVKASVPPT--VRNGTRPAPATSAGTRRADPSASEE 206
Query: 354 RIGARSVDHSDA 319
+ H A
Sbjct: 207 LLKQEIEKHKAA 218
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 457 TEPGPTCQPS-AQWKLGPRGEPEPTSTCRSARTRSAHWR 344
T GPT +P+ A W+ G G TS + R +A WR
Sbjct: 390 TSRGPTHRPTTAGWRNGANGTTRDTSRGFTQRPTTAGWR 428
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 517 GRP-AKAKDGE-GLAQRARCQCTEPGPTCQPSAQWKLGPRGEP 395
G+P A + G G + C+ T P P CQP Q GP G+P
Sbjct: 108 GKPGAPGQPGTPGRPPQQPCEPTTP-PPCQPCPQGPPGPPGQP 149
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = -2
Query: 527 ATSRPTRQGQGWRGSCPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSAL 348
+TS P+ G GS SS + +S LP+ + G+T TN S++ S+
Sbjct: 762 STSVPSSTGATSSGSTVGSST-MGSTQSSLPSSTMTNTGSTGSTVTNQLASSSTYGASST 820
Query: 347 APGALITPTPFLPAESTSMLSTPAPARPTT 258
P A T P + ++T + T
Sbjct: 821 EPIASSTANPGSSTSGQTAVTTQGSSSTQT 850
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical
protein C50B6.4 protein.
Length = 291
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = -3
Query: 517 GRPAKAKDGEGLAQRA----RCQCTEPGPTCQPSAQWKLGPRGEP 395
G+P A G+ +C EPGP + A GP G+P
Sbjct: 112 GKPGTAGVAVGIVSEGGPCIKCPAGEPGPAGEAGAPGPAGPDGQP 156
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 481 AQRARCQCTEPGPTCQPSAQWKLGPRGE 398
AQ C PGP QP AQ + G GE
Sbjct: 81 AQSNGCPAGPPGPPGQPGAQGEAGHAGE 108
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 481 AQRARCQCTEPGPTCQPSAQWKLGPRGE 398
AQ C PGP QP AQ + G GE
Sbjct: 81 AQSNGCPAGPPGPPGQPGAQGEAGHAGE 108
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 543 GVHPSGHLAADPPRPRMARVLPSELAASVQSPVPPASLQRS 421
G + + A PPRP P A SV+SP+PP Q+S
Sbjct: 359 GTNAAQSPANAPPRPPP----PRPAAPSVESPIPPPRTQQS 395
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 543 GVHPSGHLAADPPRPRMARVLPSELAASVQSPVPPASLQRS 421
G + + A PPRP P A SV+SP+PP Q+S
Sbjct: 743 GTNAAQSPANAPPRPPP----PRPAAPSVESPIPPPRTQQS 779
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 543 GVHPSGHLAADPPRPRMARVLPSELAASVQSPVPPASLQRS 421
G + + A PPRP P A SV+SP+PP Q+S
Sbjct: 743 GTNAAQSPANAPPRPPP----PRPAAPSVESPIPPPRTQQS 779
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 543 GVHPSGHLAADPPRPRMARVLPSELAASVQSPVPPASLQRS 421
G + + A PPRP P A SV+SP+PP Q+S
Sbjct: 722 GTNAAQSPANAPPRPPP----PRPAAPSVESPIPPPRTQQS 758
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 543 GVHPSGHLAADPPRPRMARVLPSELAASVQSPVPPASLQRS 421
G + + A PPRP P A SV+SP+PP Q+S
Sbjct: 722 GTNAAQSPANAPPRPPP----PRPAAPSVESPIPPPRTQQS 758
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 517 GRP-AKAKDG-EGLAQRARCQCTEPGPTCQPSAQWKLGPRGEP 395
GRP A + G G A C+ T P P C+P Q GP G P
Sbjct: 122 GRPGAPGQPGVPGKPPTAPCEPTTP-PPCKPCPQGPPGPPGPP 163
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.5 bits (58), Expect = 9.8
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Frame = -2
Query: 548 PKAYILVATSRPTRQGQGWRGSCPASSLPVYRARSHLPAFSAVEAGTTWRART----NIN 381
PK I A+ T + + G P + V + PA A T +
Sbjct: 187 PKKIIPPASGYVTSEQEQGAGDAPEPAPVVEETPAPTPAAEETPAPATEASNAVGTPEGY 246
Query: 380 VQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFASRLRPT 234
V +++A SA+A A+ TP P AE T PAPA + A PT
Sbjct: 247 VDGTANAASAVAEPAVETPAPAPAAEET-----PAPATSSEEAPAPAPT 290
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = -3
Query: 517 GRPAKAKDGEGLAQRA----RCQCTEPGPTCQPSAQWKLGPRGEP 395
G+P A G+ +C EPGP + A GP G+P
Sbjct: 112 GKPGTAGVAVGIVSEGGPCIKCPAGEPGPAGEAGAPGPAGPDGQP 156
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 416 AGTTWRARTNINVQVSSHALSALAPGALITP-TPFLP-AESTSMLSTPAPARPTTFASRL 243
A T+ A TN+ + S P +P T P + STS S+PAP P T +
Sbjct: 241 ASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPVSSSTSSTSSPAPTNPPTTS--- 297
Query: 242 RPT 234
RPT
Sbjct: 298 RPT 300
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = -3
Query: 517 GRPAKA-----KDGEGLAQRARCQCTEPGPTCQPSAQWKLGPRGEPEPTSTCRS 371
GRP KA G + C+ P P C+P Q GP G P P S
Sbjct: 120 GRPGKAGAPGLPGNPGRPPQQPCEPITP-PPCKPCPQGPAGPPGPPGPAGDAGS 172
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 517 GRP-AKAKDG-EGLAQRARCQCTEPGPTCQPSAQWKLGPRGEP 395
GRP A + G G A C+ T P P C+P Q GP G P
Sbjct: 122 GRPGAPGQPGVPGKPPTAPCEPTTP-PPCKPCPQGPPGPPGPP 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,159
Number of Sequences: 27780
Number of extensions: 375214
Number of successful extensions: 1967
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1960
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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