Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0359
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein. 31 5.2
BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase... 30 9.1
BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase... 30 9.1
BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein. 30 9.1
BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein. 30 9.1
BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein. 30 9.1
BC006430-1|AAH06430.1| 402|Homo sapiens Unknown (protein for IM... 30 9.1
AL137186-7|CAI41075.1| 404|Homo sapiens F-box protein, helicase... 30 9.1
AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase... 30 9.1
AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase... 30 9.1
AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens ... 30 9.1
AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens ... 30 9.1
AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein pr... 30 9.1
AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1 pr... 30 9.1
>AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein.
Length = 1043
Score = 30.7 bits (66), Expect = 5.2
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T+ K+
Sbjct: 389 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATNVKE 428
>BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 389 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 428
>BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 389 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 428
>BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein.
Length = 969
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 315 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 354
>BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein.
Length = 978
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 324 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 363
>BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein.
Length = 908
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 254 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 293
>BC006430-1|AAH06430.1| 402|Homo sapiens Unknown (protein for
IMAGE:3546002) protein.
Length = 402
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 333 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 372
>AL137186-7|CAI41075.1| 404|Homo sapiens F-box protein, helicase,
18 protein.
Length = 404
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 126 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 165
>AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1094
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 440 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 479
>AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 389 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 428
>AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens
cDNA FLJ38024 fis, clone CTONG2012996, highly similar to
Mus musculus F-box protein FBX18 mRNA. ).
Length = 1043
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 389 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 428
>AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens
cDNA FLJ14590 fis, clone NT2RM4001880, weakly similar to
PUTATIVE DNA HELICASE II HOMOLOG (EC 3.6.1.-). ).
Length = 779
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 125 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 164
>AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 388 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 427
>AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1
protein.
Length = 969
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -2
Query: 451 VLLSHKRETGKQLMNRTIRYYTFYCYYPLHNWIIQTTDNKK 329
VLL RE G + NR I Y FYC Y N Q T K+
Sbjct: 315 VLLYAMREKGINISNR-IHYNIFYCLYLQENSCTQATKVKE 354
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,312,953
Number of Sequences: 237096
Number of extensions: 1601346
Number of successful extensions: 1708
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -