Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= prgv0358
(700 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0001554F52 Cluster: PREDICTED: similar to Phospholip... 73 5e-12
UniRef50_A7SQD4 Cluster: Predicted protein; n=1; Nematostella ve... 67 3e-10
UniRef50_Q9Y263 Cluster: Phospholipase A-2-activating protein; n... 67 3e-10
UniRef50_UPI000051A68D Cluster: PREDICTED: similar to phospholip... 64 3e-09
UniRef50_UPI00015B433A Cluster: PREDICTED: similar to Phospholip... 56 8e-07
UniRef50_UPI0000D57422 Cluster: PREDICTED: similar to phospholip... 52 2e-05
UniRef50_Q175G1 Cluster: Phospholipase a-2-activating protein; n... 50 5e-05
UniRef50_Q95NM4 Cluster: Putative uncharacterized protein ufd-3;... 49 1e-04
UniRef50_Q9GUB1 Cluster: Phospholipase A2 activating protein hom... 41 0.025
UniRef50_Q3E7Q5 Cluster: Uncharacterized protein At3g18860.2; n=... 38 0.18
UniRef50_Q5C405 Cluster: SJCHGC01657 protein; n=2; Schistosoma j... 36 0.96
UniRef50_A7GED7 Cluster: Phage tail tape measure protein, TP901 ... 36 1.3
UniRef50_UPI0000384089 Cluster: COG0201: Preprotein translocase ... 35 2.2
UniRef50_Q04TP3 Cluster: N-acetylneuraminic acid (Sialic acid) s... 35 2.2
UniRef50_P47135 Cluster: Protein JSN1; n=2; Saccharomyces cerevi... 35 2.2
UniRef50_Q3KCD8 Cluster: Acyltransferase 3; n=2; Proteobacteria|... 34 3.9
UniRef50_Q23TB4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_Q2LQP9 Cluster: Hypothetical cytosolic protein; n=1; Sy... 33 5.1
UniRef50_Q1PVY2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_UPI0000F1EF27 Cluster: PREDICTED: hypothetical protein;... 33 8.9
UniRef50_Q0LP43 Cluster: Beta-ketoacyl synthase; n=1; Herpetosip... 33 8.9
UniRef50_Q02XC6 Cluster: ABC-type antimicrobial peptide transpor... 33 8.9
UniRef50_A7F084 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
>UniRef50_UPI0001554F52 Cluster: PREDICTED: similar to Phospholipase
A-2-activating protein (PLAP); n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to Phospholipase
A-2-activating protein (PLAP) - Ornithorhynchus anatinus
Length = 373
Score = 73.3 bits (172), Expect = 5e-12
Identities = 30/89 (33%), Positives = 54/89 (60%)
Frame = +1
Query: 235 VNVIEEKLEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPAN 414
+ ++ + + WP++I+FP LD+ RL+++N +N K G F +LL L P PAN
Sbjct: 174 LQILWKAINWPEDIVFPALDILRLSIKNPSVNESFCSEKEGEQFSIHLLKFLNPKGKPAN 233
Query: 415 IMLTMRVLVNAFSDLPGEMLVLAARETVM 501
+L +R L N F + G+ L+++ RE+++
Sbjct: 234 QLLALRTLCNCFINQAGQRLLMSQRESIV 262
>UniRef50_A7SQD4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 549
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +1
Query: 259 EWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANIMLTMRVL 438
+WP + LFPVLD+ RL VR++ + A + GP+ V+ LL + D L AN++L+ R+
Sbjct: 310 QWPADSLFPVLDIVRLVVRHQSLAANVS----GPDLVEQLLMISGRDGLTANVLLSFRIF 365
Query: 439 VNAFSDLPGEMLVLAARETVM 501
N FS G+ ++L RE ++
Sbjct: 366 ANLFSSADGKAVILQYREKII 386
>UniRef50_Q9Y263 Cluster: Phospholipase A-2-activating protein;
n=31; Eumetazoa|Rep: Phospholipase A-2-activating
protein - Homo sapiens (Human)
Length = 795
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/89 (31%), Positives = 53/89 (59%)
Frame = +1
Query: 235 VNVIEEKLEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPAN 414
+ ++ + + P++I+FP LD+ RL++++ +N + K G F +L+ LL P PAN
Sbjct: 596 LQILWKAINCPEDIVFPALDILRLSIKHPSVNENFCNEKEGAQFSSHLINLLNPKGKPAN 655
Query: 415 IMLTMRVLVNAFSDLPGEMLVLAARETVM 501
+L +R N F G+ L+++ RE++M
Sbjct: 656 QLLALRTFCNCFVGQAGQKLMMSQRESLM 684
>UniRef50_UPI000051A68D Cluster: PREDICTED: similar to phospholipase
A2, activating protein; n=2; Apocrita|Rep: PREDICTED:
similar to phospholipase A2, activating protein - Apis
mellifera
Length = 782
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +1
Query: 256 LEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANIMLTMRV 435
L W +ILFPVLD+TRLAV +++N D +Q + + PD LP+N MLT R+
Sbjct: 585 LNWSDDILFPVLDITRLAVLCREVN----DVLCTEELLQIVKKHIKPDALPSNQMLTFRL 640
Query: 436 LVNAFSDLPGEMLVLAARETVM 501
L N FS GE L L ++ ++
Sbjct: 641 LANMFSHEKGEKLCLNCKDEIL 662
Score = 42.3 bits (95), Expect = 0.011
Identities = 16/47 (34%), Positives = 33/47 (70%)
Frame = +2
Query: 62 FVPHDSYIRFDQANIKAIYDKLREFNSKVGDGHNPLSDEQLQNVVKL 202
++PH Y++ +QAN+ I +K++E N+K D + +++L+++VKL
Sbjct: 519 YIPHTKYLKLEQANLSQILEKIKELNTKQNDPFK-VPNDKLESLVKL 564
>UniRef50_UPI00015B433A Cluster: PREDICTED: similar to Phospholipase
A-2-activating protein (PLAP); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to Phospholipase
A-2-activating protein (PLAP) - Nasonia vitripennis
Length = 737
Score = 56.0 bits (129), Expect = 8e-07
Identities = 30/89 (33%), Positives = 46/89 (51%)
Frame = +1
Query: 235 VNVIEEKLEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPAN 414
+NV++ L WP ++FPVLD+ RLAV +N Q + L + D + +N
Sbjct: 529 MNVLKALLNWPDNVVFPVLDIARLAVLRAGVNEQFCSN----GILDVLKRHVQNDAVTSN 584
Query: 415 IMLTMRVLVNAFSDLPGEMLVLAARETVM 501
MLT R+L N FS GE + ++ V+
Sbjct: 585 QMLTFRLLANLFSHETGEQFCIRSKNEVL 613
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +2
Query: 62 FVPHDSYIRFDQANIKAIYDKLREFNSKVGDGHNPLSDEQLQNVVKL 202
++P Y++ +QANI AIY+KL+EFNSK DG + E+L+++V L
Sbjct: 470 YIPQRQYLKLEQANISAIYEKLKEFNSKNEDGIQRIEPEKLESLVNL 516
>UniRef50_UPI0000D57422 Cluster: PREDICTED: similar to phospholipase
A2, activating protein; n=3; Endopterygota|Rep:
PREDICTED: similar to phospholipase A2, activating
protein - Tribolium castaneum
Length = 844
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPD-NLPANIMLTMR 432
LEWP EI+FPV+DV R+AVR K+ N ++ T + ++ LL+ + + N+ N+++ +R
Sbjct: 643 LEWPDEIVFPVVDVIRMAVRFKK-NNEIIATANSGSLLRKLLSFINENCNIINNVIVALR 701
Query: 433 VLVNAFSDLPGEMLVLAARETVMHS 507
L N GE LV R V+ +
Sbjct: 702 TLSNLLMHEFGEDLVFEHRFDVVEN 726
Score = 39.5 bits (88), Expect = 0.078
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +2
Query: 5 TSTGSGAYVTQAAISTE-KPFVPHDSYIRFDQANIKAIYDKLREFNSKVGDGHN-PLSDE 178
++T + V+ + IS++ F P ++Y F+ + I KL+EFN K GD + P+++
Sbjct: 558 SATQAKQTVSSSTISSQVSKFFPINTYRTFEMGDSNVILVKLKEFNEKTGDSQSPPVNEH 617
Query: 179 QLQNVVKL 202
L +VKL
Sbjct: 618 YLVELVKL 625
>UniRef50_Q175G1 Cluster: Phospholipase a-2-activating protein; n=2;
Culicidae|Rep: Phospholipase a-2-activating protein -
Aedes aegypti (Yellowfever mosquito)
Length = 796
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 262 WPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANIMLTMRVLV 441
WP E LFPVLD+TRL VR+ + ++F+ + +Q++ ++LPAN M+ R V
Sbjct: 607 WPTEKLFPVLDITRLVVRDPKACQELFEGDFMKTLLQHI------NHLPANQMMGTRCFV 660
Query: 442 NAFSDLPGEMLV 477
N S G +V
Sbjct: 661 NMISHPVGRNIV 672
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = +2
Query: 11 TGSGAYVTQAA-ISTEKPFVPHDSYIRFDQANIKAIYDKLREFNSKVGDGHNPLSDEQLQ 187
TG +Y T + + P+ ++ + A++ + KL+EFN K+ D +SD+ L
Sbjct: 519 TGGSSYSTGSTEVKKTNTHFPNRHFVTMESADLSKVLVKLKEFNGKIEDKSLQMSDDTLD 578
Query: 188 NVVK-LGELNSTHDPET--LTLLKKSWN 262
++++ +GEL++ + + LT LK +N
Sbjct: 579 DIIRYVGELSTMSEQNSVCLTALKYLYN 606
>UniRef50_Q95NM4 Cluster: Putative uncharacterized protein ufd-3;
n=3; Caenorhabditis|Rep: Putative uncharacterized
protein ufd-3 - Caenorhabditis elegans
Length = 860
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 238 NVIEEKLEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI 417
+ E L+WP E L PVLD R+A+ + +N+ D + G V L+ +L D PA++
Sbjct: 648 SAFEMSLQWPVEHLTPVLDFLRIALTHHSLNSYFCDRERGQELVGRLIAILVSD--PADV 705
Query: 418 ---MLTMRVLVNAFSDLPGEML 474
+L R + NAFS G L
Sbjct: 706 ALKVLVCRCIANAFSHPVGRNL 727
>UniRef50_Q9GUB1 Cluster: Phospholipase A2 activating protein
homolog; n=5; Diptera|Rep: Phospholipase A2 activating
protein homolog - Drosophila melanogaster (Fruit fly)
Length = 787
Score = 41.1 bits (92), Expect = 0.025
Identities = 25/76 (32%), Positives = 44/76 (57%)
Frame = +1
Query: 256 LEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANIMLTMRV 435
L+WP + FPVLD+ RLAVRN+ + + + ++ NF+ ++ L+ + P N ++ +R
Sbjct: 594 LKWPASMQFPVLDILRLAVRNETLFSVLNNSH---NFLATVIPQLS-GSAP-NQLMVVRC 648
Query: 436 LVNAFSDLPGEMLVLA 483
L N S G V++
Sbjct: 649 LANIMSHAAGRQNVMS 664
Score = 33.1 bits (72), Expect = 6.7
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +2
Query: 47 STEKPFVPHDSYIRFDQANIKAIYDKLREFNSKVGDGHNPLSDEQLQNVVKLGELNSTHD 226
S +K F P +Y FD + K + +K+ EFN K+ + +E L V+KL + + D
Sbjct: 525 SGDKHF-PVSNYRIFDTCDAKKVLEKMIEFNGKLSLPDGRVGEEVLLAVIKLADQSPELD 583
Query: 227 PETLTLL 247
+L L
Sbjct: 584 LTSLEAL 590
>UniRef50_Q3E7Q5 Cluster: Uncharacterized protein At3g18860.2; n=3;
core eudicotyledons|Rep: Uncharacterized protein
At3g18860.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 38.3 bits (85), Expect = 0.18
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +1
Query: 262 WPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLL---APDN-LPANIMLTM 429
WP ++FP D+ R+ V + A + K+ N LL L+ D+ LPAN++ T+
Sbjct: 567 WPPAMMFPATDIVRMLVLHHH-GASLL-IKHVENNNDLLLDLIKKVTEDSALPANLLTTV 624
Query: 430 RVLVNAFSD 456
RVLVN F +
Sbjct: 625 RVLVNLFKN 633
>UniRef50_Q5C405 Cluster: SJCHGC01657 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01657 protein - Schistosoma
japonicum (Blood fluke)
Length = 386
Score = 35.9 bits (79), Expect = 0.96
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 238 NVIEEKLEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLLTLLAPDNLPANI 417
N+I+ +W +I+FP+LD+ R V ++ + +F+T + + ++ D AN
Sbjct: 99 NIIDVINKWTPDIIFPLLDILRCLVFWQKSSDIIFETSNWNHLLS--ISFDKADLSSANC 156
Query: 418 MLTMRVLVNAF-SDLP 462
+L +R+LVN +D P
Sbjct: 157 LLILRLLVNCLAADCP 172
>UniRef50_A7GED7 Cluster: Phage tail tape measure protein, TP901
family; n=1; Clostridium botulinum F str. Langeland|Rep:
Phage tail tape measure protein, TP901 family -
Clostridium botulinum (strain Langeland / NCTC 10281 /
Type F)
Length = 1166
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +2
Query: 83 IRFDQANIKAIYDKLREFNSKVGDGHNPLSDEQLQNVVKLGEL 211
IR A I + DKL E SK+ D + LSDEQL+N+ K G +
Sbjct: 511 IRLGDA-IAPMMDKLSELMSKLSDKLSGLSDEQLKNIAKWGAM 552
>UniRef50_UPI0000384089 Cluster: COG0201: Preprotein translocase
subunit SecY; n=1; Magnetospirillum magnetotacticum
MS-1|Rep: COG0201: Preprotein translocase subunit SecY -
Magnetospirillum magnetotacticum MS-1
Length = 300
Score = 34.7 bits (76), Expect = 2.2
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = -3
Query: 662 YASLSVILLKELKHALGELHAVRLLGEGDRQVQ*QGTRRYLSVVIELCEAYGECITVSLA 483
Y S S+IL + + + L AV+ GE R+ Q TR YL+VVI + +AYG I V L
Sbjct: 89 YISASIIL-QLMTTVIPSLEAVKKEGESGRKKINQYTR-YLTVVIAVMQAYG--IAVGLE 144
Query: 482 ASTS 471
+ TS
Sbjct: 145 SMTS 148
>UniRef50_Q04TP3 Cluster: N-acetylneuraminic acid (Sialic acid)
synthetase; n=6; Bacteria|Rep: N-acetylneuraminic acid
(Sialic acid) synthetase - Leptospira borgpetersenii
serovar Hardjo-bovis (strain JB197)
Length = 364
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 5 TSTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIYDKLREFNSKVGDGHN-PLSDEQ 181
T+T G+ V + + +K +D Y D+ ++K KL+EF S +G PL E+
Sbjct: 238 TATLFGSVVLEKHFTHDKTLPGNDHYHAMDKEDLKRFKRKLKEFESLIGSSEKAPLQSEE 297
Query: 182 L 184
L
Sbjct: 298 L 298
>UniRef50_P47135 Cluster: Protein JSN1; n=2; Saccharomyces
cerevisiae|Rep: Protein JSN1 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 1091
Score = 34.7 bits (76), Expect = 2.2
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +1
Query: 319 KQINAQMFDTKYGPNFVQYLLTL-LAPDNLPANIMLTMR-VLVNAFSDLPGEMLVLAARE 492
K++ + +T YGP FV +L + L D+L A+I+ +R VL ++ P L+ E
Sbjct: 852 KELTKLLCETNYGPTFVHKVLAMPLLEDDLRAHIIKQVRKVLTDSTQIQPSRRLL---EE 908
Query: 493 TVMHSPYASHN 525
+ SP ++HN
Sbjct: 909 VGLASPSSTHN 919
>UniRef50_Q3KCD8 Cluster: Acyltransferase 3; n=2;
Proteobacteria|Rep: Acyltransferase 3 - Pseudomonas
fluorescens (strain PfO-1)
Length = 349
Score = 33.9 bits (74), Expect = 3.9
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -3
Query: 545 YLSVVIELCEAYGECITVSLAASTSISPGRSLNAFTSTRIVNIMFAGRLSGANNVSR-YW 369
++S VI LC A+ C T++ + +I R +A ++N+ F G + G + YW
Sbjct: 78 FISRVIRLCPAFWVCCTITFLVTLAIGQPR-FSADLYQYVINLTFLGDVIGVPPIDGVYW 136
Query: 368 TKFGPYLVSNICALICLFR 312
+ F + A++ F+
Sbjct: 137 SLFVEIKFYFMIAILLAFK 155
>UniRef50_Q23TB4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 743
Score = 33.9 bits (74), Expect = 3.9
Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 256 LEWPKEILFPVLDVTRLAVRNKQINAQMFDTKYGPNFVQYLL-TLLAPDNLPANIMLTMR 432
+ WPK+ + P+ D+ R+ + Q +A G ++ + L++ +N + ++
Sbjct: 552 INWPKQYMLPIFDLFRIFALHPQSDALFSGVDSGLHYFTVICGGLMSEENNDVTKNVILK 611
Query: 433 VLVNAFSDLPG 465
+LVN F+ G
Sbjct: 612 ILVNLFNQTSG 622
>UniRef50_Q2LQP9 Cluster: Hypothetical cytosolic protein; n=1;
Syntrophus aciditrophicus SB|Rep: Hypothetical cytosolic
protein - Syntrophus aciditrophicus (strain SB)
Length = 256
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 191 VVKLGELNSTHDPETLT-LLKKSWNGRKRYCSRY-WM*QGWLSGTNRSTHR 337
V +LG L++ + TL L K WN ++ + Y WM +GWL G R T R
Sbjct: 108 VKRLGLLSADGEGFTLRGLCKLLWNDQENHSIVYRWMEKGWLKGKRRGTLR 158
>UniRef50_Q1PVY2 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 133
Score = 33.5 bits (73), Expect = 5.1
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +2
Query: 161 NPLSDEQLQNVVKLGELNSTHDPETLT--LLKKSWNGRKRYCSRYW 292
N + D+ +Q V L E+ T++ +T ++KK+WN RK+Y YW
Sbjct: 47 NEVDDDAIQKV--LMEIIETYNISVITTEIIKKAWNLRKQYRYSYW 90
>UniRef50_UPI0000F1EF27 Cluster: PREDICTED: hypothetical protein;
n=2; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1119
Score = 32.7 bits (71), Expect = 8.9
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Frame = -3
Query: 467 SPGRSLNAFTSTRIVNIMFAGRLSGANNV------SRYWTKFGPYLVSNICAL----ICL 318
+PGRSL F S R+ N+MF+ L ++ R+ PYL SN+ I
Sbjct: 762 NPGRSLMVFFSLRVTNMMFSDDLFNKSSAEYKALEQRFIELLVPYLQSNLSHFENLEILN 821
Query: 317 FRTASLVTSS 288
FR S+V +S
Sbjct: 822 FRNGSIVVNS 831
>UniRef50_Q0LP43 Cluster: Beta-ketoacyl synthase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-ketoacyl synthase -
Herpetosiphon aurantiacus ATCC 23779
Length = 1416
Score = 32.7 bits (71), Expect = 8.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 452 LNAFTSTRIVNIMFAGRLSGANNVSRYW 369
++A+T T I I AGR GANN++ +W
Sbjct: 1 MHAYTDTDIAIIGMAGRFPGANNLTTFW 28
>UniRef50_Q02XC6 Cluster: ABC-type antimicrobial peptide transport
system, permease component; n=2; Lactococcus lactis|Rep:
ABC-type antimicrobial peptide transport system,
permease component - Lactococcus lactis subsp. cremoris
(strain SK11)
Length = 669
Score = 32.7 bits (71), Expect = 8.9
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = -3
Query: 392 ANNVSRYWTKFGPYLVSNICALICLFRTASLVTSSTGNNISFGHS 258
ANN+ + + F P+L+++I + +F TAS+ S + + + G +
Sbjct: 8 ANNIKKGFKSFAPFLMASITMFVMIFVTASIALSPSIHKLKGGEA 52
>UniRef50_A7F084 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1177
Score = 32.7 bits (71), Expect = 8.9
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +2
Query: 5 TSTGSGAYVTQAAISTEKPFVPHDSYIRFDQANIKAIYDKLREFNSKVGDGHNPLSDEQL 184
T T Y+ A+ + VP + +A K+I D+L++++ ++G + D +
Sbjct: 927 TETRVEEYIESASQICARIQVPPNETRASLEAKYKSISDQLQQYSRRLGVTEQEIIDNYV 986
Query: 185 Q--NVVKLGELNSTHDPETLTLLKKSWNGRKR 274
Q ++K + H ETL LLK S++ R +
Sbjct: 987 QAKEMLKSFKSRRKHMEETLRLLKYSFSMRMK 1018
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,946,149
Number of Sequences: 1657284
Number of extensions: 13439598
Number of successful extensions: 40925
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 39337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40895
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -